Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04452 ATGTGGGGGTTTGGTGGTAGATATTATTGGGGAAGAAGAGAAAGAAAGGTTGATTTTGAGAAACAAGATGGGATAGTTGTTGTGTTTGCATGGATGTCAAGTGAAGAAAAGCACTTAATGAGATATGTGGATCTATACTCTTCTCTTGGATGGAATTCACTTATTTGCCACTCTCAATTTCTCAATATGTTCTTCCCAGATAAAGCCACAATTCTTGCTGTTGATATTCTAAATGAACTCGTTGAGGTGCTGAAAATTAGACCTTGTCCCATTGTCTTTGCTTCTTTTTCTGGTGGTGCAAAAGCGTGTATGTTAAAGGTTCTACAGATAATTAGTGGGACAAGTGAAACACATAATATGGATGATTACCAGCTTGTTAAAGACTGTATCTCTGGCTATATTTATGATTCCAGTCCAGTTGATTTTACGAGTGATATGGGCGTTCGATTTATTCTTCACCCATCTGTTTTAAAAGTGTCCCATCCTCCAAGATTTGCTTCATGGATTGCCAATGGCATAGCATCTGGTCTTGATTCCCTTTTCCTCAACAGATTTGAATCACAACGTGCAGAGTATTGGCGAACACTTTACTCCACCACTAGTATGCAGGTTCCATATCTCATTTTTTGTTCAGAAAATGATGATCTTGCTCCTTTTGAAGTTATTTCAAATTTTTTCCATCGACTAAAAGACCTTGGCGGTGATGTCAAACTTGTAAAGTGGAGTTCCACTCTTCATGTAGGTCATTTTCGTCATCATCCTGATGAATATGAAGCTGCTATCACTGAGATCCTTGGCAAGGCAGTTGCAATTTACTGTCACAAAAACAGAATAATCGTAGAAGAGGAGAAACTGGGCATAGAGGGAACAACAGATGAGATCATAAATCGGTTCTCTGAACTGAGGAAAGCAGCAAGAACATCAACTAGCTTCCAGGGTTTCGCTGTTGCTCCAAGTGACAATTTATCTCCTAGTTCAATGGAGTATTACTACGGTAAAGATGTTGGCTCCGTAACAGATGAACGAAAAGGAAATTTTATTCATCTGCCAAGCCGTCCAAGCATAAACGCCAACGGTGTTCTTGGCCAAATATTATTTGATGTTTGTGTTCCAAAGACAGTAGAGGATTGGGATGTTCAGTCAAATTCAAAAAATACAGGACTATTATCTGGTACAAGGAGGCATGCTCCTTTCAATCCTATAAAATGCATCCGGCGCTCAAGGTTGTAA 1230 0.3927 MWGFGGRYYWGRRERKVDFEKQDGIVVVFAWMSSEEKHLMRYVDLYSSLGWNSLICHSQFLNMFFPDKATILAVDILNELVEVLKIRPCPIVFASFSGGAKACMLKVLQIISGTSETHNMDDYQLVKDCISGYIYDSSPVDFTSDMGVRFILHPSVLKVSHPPRFASWIANGIASGLDSLFLNRFESQRAEYWRTLYSTTSMQVPYLIFCSENDDLAPFEVISNFFHRLKDLGGDVKLVKWSSTLHVGHFRHHPDEYEAAITEILGKAVAIYCHKNRIIVEEEKLGIEGTTDEIINRFSELRKAARTSTSFQGFAVAPSDNLSPSSMEYYYGKDVGSVTDERKGNFIHLPSRPSINANGVLGQILFDVCVPKTVEDWDVQSNSKNTGLLSGTRRHAPFNPIKCIRRSRL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04452 409 PANTHER UNCHARACTERIZED 21 271 IPR008547 -
Trre5g04452 409 Pfam Eukaryotic protein of unknown function (DUF829) 130 377 IPR008547 -
Trre5g04452 409 Pfam Eukaryotic protein of unknown function (DUF829) 25 118 IPR008547 -
Trre5g04452 409 SUPERFAMILY alpha/beta-Hydrolases 67 267 IPR029058 -
Trre5g04452 409 Gene3D alpha/beta hydrolase 65 268 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04452 Trre-Chr5 46550204 46559054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04452 - - gmx:100810227 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04452 5 46550204 46559054 Trre5g04452 5 46550204 46559054 ECH