Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04441 ATGACGAAGGTAGTCGTCACCGGTGCATCTGGTTACCTTGGTGGAAGGCTCTGTCACGCCCTCCTCCGTCAAGGTTACTCCGTTAAGGCTCTCGTCAGACGCACCAGCGATCTTTCCGAACTTCCTCCCCTTTCTGAAATTGTCTACGGCGACGTCACCGACTTTTCTTCTCTCCTCTCCGCCTTCTCCGATTGCTCCGTCGTTTTCCACCTCGCCGCTCTCGTTGAGCCTTGGCTCCCTGATCCCTCTAAATTCATCACTGTGAATGTTGAAGGTTTGAAGAATGTGTTGAAAGCAGTGAAGCAAACCAACACGGTGGAGAAACTCATATATACGTCGTCGTTTTTCGCTATAGGACCAACCGACGGAGCTATTGCCGATGAGAATCACTTTCATCATGAGAAATTTTTCTGCACGGAATATGAGAAATCAAAGGTTGCCACTGACAAAATTGCACTTCAAGCTGCATCTGAGGGGGTGCCAATAGTATTGCTTTATCCTGGGGTTATTTATGGACCTGGTAAAGTCACTGGAGGAAATGTTGTTGCAAAGATGCTGGTAGAACGTTTCAGTGGTCGATTACCTGGTTATGTAGGCAATGGAAATGATAAATGTTCGTACAGTCATGTTGATGATGTAGTGGAGGGGCACATTGCTGCTATGGAAAAGGGCAAAATTGGGGAGAGGTATTTACTGACGGGTGAAAATGCGTCGTTTAATCAAGTTTTTGATATGGCTGCTGTTATCACTAATACTAGAAAACCAATGGTTAATATCCCTTTGTGGGTGATTGACGTGTATGGGTGGTTGTCAGTATTATTCTCTCGAATCACTGGAAAGTTACCTCTCATTAGTCCACCGATGGTGCATGTTTTAAGACATCAGTGGGAGTATTCCTGCGAGAAAGCTAAAAGGGAGCTAGATTATAAGCCCAGAAGCTTGAGAGAAGGCCTTGCAGAGGTACTACTCTGGTTGAAGAACTTGGGATTAATAAGATATTAG 1002 0.4521 MTKVVVTGASGYLGGRLCHALLRQGYSVKALVRRTSDLSELPPLSEIVYGDVTDFSSLLSAFSDCSVVFHLAALVEPWLPDPSKFITVNVEGLKNVLKAVKQTNTVEKLIYTSSFFAIGPTDGAIADENHFHHEKFFCTEYEKSKVATDKIALQAASEGVPIVLLYPGVIYGPGKVTGGNVVAKMLVERFSGRLPGYVGNGNDKCSYSHVDDVVEGHIAAMEKGKIGERYLLTGENASFNQVFDMAAVITNTRKPMVNIPLWVIDVYGWLSVLFSRITGKLPLISPPMVHVLRHQWEYSCEKAKRELDYKPRSLREGLAEVLLWLKNLGLIRY 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04441 333 Pfam NAD dependent epimerase/dehydratase family 4 230 IPR001509 -
Trre5g04441 333 Gene3D - 1 332 - -
Trre5g04441 333 PANTHER PROTEIN YEEZ 1 322 - -
Trre5g04441 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 329 IPR036291 -
Trre5g04441 333 CDD AR_FR_like_1_SDR_e 4 325 - -
Trre5g04441 333 FunFam NAD(P)-binding Rossmann-fold superfamily protein 1 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04441 Trre-Chr5 46489537 46491543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04441 4 242 Miscellaneous Gene Families AT1G09510 30.651 6.60e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04441 K15891 - gmx:100792747 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04441 5 46489537 46491543 Trre5g04441 5 46489537 46491543 ECH