Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04328 ATGAAGTCTTCTTCGGATGATGAACATGATGAAGAAAATGTAAAGTTGTTGGAAAAAAGCAGAGAAAGAGGTTCAAGAAATGGAAGGGTTGTTAAAGTTCATAATCAAGCTTTATTATCTGGACTTGCTTATTGTCTTTCCTCTTGTGGCATGATTTTAGTTAATAAATTTGTACTTTCTAGCTATGATTTTAATGCTGGAATTTCCTTAATGGTCTATCAGAATTTCATTTCGGTGATCATTGTTTCTGTGTTGAGCCTTCTGGGTTTAGTTTCAACTGAACCGTTGACATGGAGATTGATTAAAGTTTGGTTGCCTGTCAATGTTATATTTGTTGGAATGCTAATTACAAGCATGTTTAGTTTGAAATACATTAATGTAGCGATGGTGACAGTCTTGAAGAATGTTACGAATGTCATAACCGCCGTTGGTGAAATGTACTTGTTCAAGAAGCAGCATGAAGGCAGAGTCTGGGCTGCTCTATTTCTGATGATCATTTCAGCAATAACCGGAGGGATTACTGATCTCTCTTTTAATGCAACGGGCTATGCGTGGCAGACACTAAACTGTTTCTTAACTGCATCATATTCTCTGACCCTACGAAGGGTCATGGATACGGCAAAGCAATATACTAAATCTGGAAATTTAAATGAGTTTTCGATGGTCTTGTTGAACAACACTCTTTCTTTGCCATTGGGAATTTTCCTGACTGTTGTTTTCAATGAGGTGGATTATCTCCTAACAACGCCACTTCTGAGATTGCCTAGCTTTTGGTTAGTGATGACATTTAGTGGATTTTTGGGTTTAGCAATTAGCTTCACATCGATGTGGTTTCTTCATCAGACAGGAGCTACAACTTACAGTCTTGTAGGTTCGTTGAATAAGATACCACTTTCAATTGCTGGCATCTTTCTCTTTAAAGTTCCTACTAGCGTGGAGAACTCTGCCAGCATTTTATTCGGTCTTTTAGCAGGAGTACTTTTCGCTAGAGCCAAAATCAGGGAGAGATCTCAAACCTGA 1020 0.3814 MKSSSDDEHDEENVKLLEKSRERGSRNGRVVKVHNQALLSGLAYCLSSCGMILVNKFVLSSYDFNAGISLMVYQNFISVIIVSVLSLLGLVSTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFKKQHEGRVWAALFLMIISAITGGITDLSFNATGYAWQTLNCFLTASYSLTLRRVMDTAKQYTKSGNLNEFSMVLLNNTLSLPLGIFLTVVFNEVDYLLTTPLLRLPSFWLVMTFSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSIAGIFLFKVPTSVENSASILFGLLAGVLFARAKIRERSQT 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04328 339 MobiDBLite consensus disorder prediction 1 21 - -
Trre5g04328 339 Pfam Triose-phosphate Transporter family 38 321 IPR004853 -
Trre5g04328 339 PANTHER SOLUTE CARRIER FAMILY 35 38 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04328 Trre-Chr5 45408530 45417565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04328 8 287 Organic Solute Cotransporters AT2G13650 79.286 2.24e-153 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04328 K15356 - gmx:100808480 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04328 5 45408530 45417565 Trre5g04328 5 45408530 45417565 ECH