Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04281 ATGGTGTTACAAAAGAAAAGCAGGAGACTTTTACAATTTGTTCCTACAGAAGATCGTGATAGGAGACTGAAACAAATGACTTCTCTTGCTTCCGCTTTAACATATTTGAATATGGAGTTTAGTAATCACCTGACATACTTTCCAGGAATAGCTCCTAAATCTCCCAATCAATCATTTTTAGAAAATGGTGACATGCAGACTCTTACTAAGGAAGATAGGAAGACCATAGAATGTTGCACAACAATGATTGGACGAGGCCAATTTCCTCCATTAATGGTCGTCTATGATTCATGCCAAGGCTATACTGTGGAGGCTGATGGCCTAATCAAAGATATGACATTTATTGCTGAATACACTGGCGATGTGGATTATTTAAGGAAAAGAGAATCTGATGATTGCGACAGCATGATGACATTGCTTCTTGCAGAAGATGGTGCGGCTAGTCTTGTTATATGTGCTGATTAA 465 0.3849 MVLQKKSRRLLQFVPTEDRDRRLKQMTSLASALTYLNMEFSNHLTYFPGIAPKSPNQSFLENGDMQTLTKEDRKTIECCTTMIGRGQFPPLMVVYDSCQGYTVEADGLIKDMTFIAEYTGDVDYLRKRESDDCDSMMTLLLAEDGAASLVICAD 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04281 154 Gene3D SET domain 1 154 IPR046341 -
Trre5g04281 154 SUPERFAMILY SET domain 59 144 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04281 Trre-Chr5 44843222 44843949 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04281 K24406 - gmx:100808815 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04281 5 44843222 44843949 Trre5g04281 5 44843222 44843949 ECH