Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04276 ATGGTTCCTCAACCGTTCTTCCTTCATGCTCAAAAGATAAATGTCTGTCTAACATGTGGTCATAAAGGAGATTTGAAGCGCCTCATATACTGTATCCAGTGTAAAGCTTGTGCTCAGCATAGCTATTGTCTAGAGAAGATCCACCGGAATGAGGATGGGAAAGTAATCTGGAGATGTGAGGACTGTACTCCAAATAACCCAAAATGCAAACCTGAACCATCAAGAAAAAGTGAGCGCATAAGTTATGCAACTGAAGTTAAATATAAAAGGATGATAATGAAAAAGAAGAGTTATGTAGTTAGAAAACAACCACTTGTTAGATCAAATGAAGGTGAAAGTGTTGGATGCCTTGCTAAAAATCACACTGAGAAGGTATTGCCAACCCTTGAGAATGAAAATGTTCTTTGTAAGAAGCCTGAATCACCCAAAGTCGATGAGACTGAGAAGGTATTGCCAATCCTTGAGAATGAAAATGTTCTTTGTAAGAAGCCTGAATCACCCAAAGTCGATGAGACTGAGAAGGTATTGCCAATCCTTGAGAATGAAAATGTTCTTTGTAAGAAGCCTGAATCACCCAAAGTCGATGAGACTGAGAAGGTATTGCCAATCCTTGAGAATGAAAATGTTCTTTGTAAGCAGTCTGAATCACCCAAAGTCAAAGATCCTTCAAATATATCATCTGGAAAGCAAGCAATGGAGTGTGAGATATATGCCGAGTCTGAAGTCTTAAGCACCGCGCCTCAGTTTCTTCATTATCCAGAGTTTGACGAACATAGTCGTGCTCGGCCACTCAGTGATCCAATTTGGACGGGGCAATTTAGATTGAACAATGCAACACATTTTCATCTTGTTGCGTACATGTCAAGTAAAGCTTCCCCAAAAGTGAAGTCGGCAGTAACAGAGCTCCCTAAACTGCTTGATGTAGAGATGTTATCAAGACGTGCTATTTGGCCTCAAAGTTTTTACGCTCATCCACCTAATAGTGATTATATTGCGCTCTATTTTTTTCCCCAATATGAAAGGGATGAGATGTTCTATGATCGTGTGCTGAACGAAGCGATTGAACAAGATAAGGCTCTCAAAGTTGTCACTAACAACCTGAATATCTTCATTTTTTCCTCGCACTTACTGCCTCCGGATGATAGGCGAATCTGCAAAAAATATTACTTGTGGAGTGTTTTCAAACCAAAGCCAAGAAACTAG 1203 0.399 MVPQPFFLHAQKINVCLTCGHKGDLKRLIYCIQCKACAQHSYCLEKIHRNEDGKVIWRCEDCTPNNPKCKPEPSRKSERISYATEVKYKRMIMKKKSYVVRKQPLVRSNEGESVGCLAKNHTEKVLPTLENENVLCKKPESPKVDETEKVLPILENENVLCKKPESPKVDETEKVLPILENENVLCKKPESPKVDETEKVLPILENENVLCKQSESPKVKDPSNISSGKQAMECEIYAESEVLSTAPQFLHYPEFDEHSRARPLSDPIWTGQFRLNNATHFHLVAYMSSKASPKVKSAVTELPKLLDVEMLSRRAIWPQSFYAHPPNSDYIALYFFPQYERDEMFYDRVLNEAIEQDKALKVVTNNLNIFIFSSHLLPPDDRRICKKYYLWSVFKPKPRN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04276 400 ProSitePatterns Zinc finger PHD-type signature. 16 62 IPR019786 -
Trre5g04276 400 PANTHER - 14 397 - -
Trre5g04276 400 SUPERFAMILY FYVE/PHD zinc finger 12 68 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04276 Trre-Chr5 44775027 44778324 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04276 - - tpra:123916594 684.485