Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04256 ATGCAAATTACGCGATGGCGAAATATTCTTTCCATCAACAATCACATTATTACATCCCTTTCGCATTTTTCAGCTTTTCATTCTACTCCGTGTTCGTCTCACAAATCGAATACTAACCCAGATATAAGAAAAGGACAACAACCATCTAAGAATCAAATCAAATTTGTTACCCGTCAAAAGCGTGCTGATGCAAAGAAAGCTCTCAAAAGTCTCCTTTACAATGGTGGATCCTCGAGATTTCCATTTCATGACAAAGAAACCAGGCGGAAACTTGATGGAAATTCTGATGGTCGTTCAAATAGCTATTCCAATAAAGGTCAACCAAAACCTGGTCGGCGGTTTGGTGGAAAACCACAAAAGAAAACTAAACAAAAAATCAGAAGAGAAAGTTTTTCTGAGGAAATTGATGGCGAACCTGAACAAATATTTCATGCAACATTTGGTAACAGACACTATACATGGTCCTTCAGAAGGGGAACTTTTTCTGAACATTCAACATACGGGTTTGAATGGAGGGAAAATACAAATAGGACAAATACAAACAAGTGGAAAACCGCAAGTGATGATGAGTCTGATGATAATGATAAAGACGATGCTTCATGCCGTGTAGGATCTAGTTCTGATAGAACTATTCTTGGTTTGCCTCCAACAGGTCCATTAAAGATAGAAGATGTTAAAATTGCTTTCCGGTTATCAGCTTTGAAATGGCATCCTGACAGGCATCAAGGCCCTTCACAGGCAACGGCGGAAGAAAAATTTAAACTATGTGTAAATGCATACAAGACATTATGCAATGCTCTCTCCCCAGCATAG 813 0.3875 MQITRWRNILSINNHIITSLSHFSAFHSTPCSSHKSNTNPDIRKGQQPSKNQIKFVTRQKRADAKKALKSLLYNGGSSRFPFHDKETRRKLDGNSDGRSNSYSNKGQPKPGRRFGGKPQKKTKQKIRRESFSEEIDGEPEQIFHATFGNRHYTWSFRRGTFSEHSTYGFEWRENTNRTNTNKWKTASDDESDDNDKDDASCRVGSSSDRTILGLPPTGPLKIEDVKIAFRLSALKWHPDRHQGPSQATAEEKFKLCVNAYKTLCNALSPA 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04256 270 CDD DnaJ 211 265 IPR001623 -
Trre5g04256 270 MobiDBLite consensus disorder prediction 180 210 - -
Trre5g04256 270 MobiDBLite consensus disorder prediction 79 137 - -
Trre5g04256 270 ProSiteProfiles dnaJ domain profile. 207 268 IPR001623 -
Trre5g04256 270 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 15 267 - -
Trre5g04256 270 SMART dnaj_3 206 268 IPR001623 -
Trre5g04256 270 MobiDBLite consensus disorder prediction 81 95 - -
Trre5g04256 270 MobiDBLite consensus disorder prediction 183 203 - -
Trre5g04256 270 MobiDBLite consensus disorder prediction 27 50 - -
Trre5g04256 270 Pfam DnaJ domain 211 265 IPR001623 -
Trre5g04256 270 SUPERFAMILY Chaperone J-domain 170 265 IPR036869 -
Trre5g04256 270 Gene3D DnaJ domain 179 268 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04256 Trre-Chr5 44489152 44493830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04256 - - cam:101501928 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04256 5 44489152 44493830 Trre5g04256 5 44489152 44493830 ECH