Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04240 ATGAAGCTATCAATTCTGCACCTCACCCTTTTGTCATTAATTATCTACCAAACCACCTTCTTTGTTTCTGCAGTTGATCCCACAATAGGGTTCACTTGTGATCCATTAGATAGCTCACACTATGTTATTCAAAAGCCTTATGATGTTTCACTAAACGATCGTTACAGCTTTTCAAATGGTGTGCACAAATTTTGGATATACCCCACAGATAAGCCTTTCGAGAGTGGTAGTACTACACAACCACGAACGGAGATTCGTGTAACTGGATATGATTATACATCTGGTATAAGACAATTTGAAGGATATGCTTATGTTCCAAGTGGCACAAGCGGGGTGTGTATTCAGCAAGTGTTCGGAGGAAGTAGTGCTTCCACAGCCTCACAACTTAGGGTCTATAGTGGTTCATTAACTCGTTATAGGTCTCCGACTTTGTCTACAAATATCTATGATAGGTGGTTTAAAGTGAACGTGATTCATGATGCAAATGCTAACAATGTTAAGGTTTATATCGATGGGGATCTCAAGTTTAGTGGAGGTGATAATGGAGATAACACTCACTACTTCAAGTTTGGGGTTTACGTACAGAATGATCCTTCCGGTTACATGGAATCTCGTTGGAAGGATATTAGAATTTGTAGAAAATAA 645 0.3907 MKLSILHLTLLSLIIYQTTFFVSAVDPTIGFTCDPLDSSHYVIQKPYDVSLNDRYSFSNGVHKFWIYPTDKPFESGSTTQPRTEIRVTGYDYTSGIRQFEGYAYVPSGTSGVCIQQVFGGSSASTASQLRVYSGSLTRYRSPTLSTNIYDRWFKVNVIHDANANNVKVYIDGDLKFSGGDNGDNTHYFKFGVYVQNDPSGYMESRWKDIRICRK 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04240 214 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 11 214 - -
Trre5g04240 214 Gene3D - 34 213 - -
Trre5g04240 214 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 202 IPR013320 -
Trre5g04240 214 Pfam Alginate lyase 37 211 IPR014895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04240 Trre-Chr5 44253979 44254984 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04240 - - gmx:547636 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04240 5 44253979 44254984 Trre5g04240 5 44253979 44254984 ECH