Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04225 ATGGATAGGTATCAGAGGGTGGAAAAGCCCAAGGCAGATACTCCTATTAACGAAAATGAGATCCGTATTACTACTCAAGGAAGAATGAGAAATTATATCACCTATGCTACCACTCTCTTTCAAGAGAAAGGATCTGATGATATTGTTCTCAAAGCAATGGGACGTGCAATAAATAAGACTGTAATGATTACTGAGCTAATAAAGAGAAGGATTGTTGGTCTGCATCAAAACACTCAAATTGGATCAACTGATATAACCGACACATGGGAACCACTAGAAGAAGGCCTTCTTCCTTTGGAGACTACTCGTCATGTTTCAATGATCACAATTACGTTGTCAAAGAAAGAGCTGAATACATCCTCCACAGGATGCTCATCCCTACTTCCAGCTGATCAAGTAAAACCGTTAAATGAATACGAAGAGGAAGGAGATGGCTCGCCAAGGATGCGAGGAAGGGGGCGTGGTCGTGGAAGGGGCAGGGGAAGAGGAATGTACAATAATGGTGGTATGGAATATGGTGATGGTTGGGATGGTGGGCGTGGCTATGGTGGCAGAGGACGTGGCCGTGCATGGGGTCGTGCTTTCAGGGGACGAGGACGAGGCTATGGTGCCCAGGCGGTTGGGTATTATGACAACGGTGAATATGATGCACCACCTGCCCCACGCGGCCGAGGTCATGGAAGGGGAAGAGGCCGTGGCCGTGATGCTGGCCGTGGAGCAGCTGCTTGA 729 0.4815 MDRYQRVEKPKADTPINENEIRITTQGRMRNYITYATTLFQEKGSDDIVLKAMGRAINKTVMITELIKRRIVGLHQNTQIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKELNTSSTGCSSLLPADQVKPLNEYEEEGDGSPRMRGRGRGRGRGRGRGMYNNGGMEYGDGWDGGRGYGGRGRGRAWGRAFRGRGRGYGAQAVGYYDNGEYDAPPAPRGRGHGRGRGRGRDAGRGAAA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04225 242 SUPERFAMILY AlbA-like 16 116 IPR036882 GO:0003676
Trre5g04225 242 Gene3D - 14 118 IPR036882 GO:0003676
Trre5g04225 242 MobiDBLite consensus disorder prediction 137 151 - -
Trre5g04225 242 MobiDBLite consensus disorder prediction 211 242 - -
Trre5g04225 242 Pfam Alba 19 83 IPR002775 GO:0003676
Trre5g04225 242 PANTHER RIBONUCLEASE P SUBUNIT P25 1 238 - -
Trre5g04225 242 MobiDBLite consensus disorder prediction 137 163 - -
Trre5g04225 242 FunFam DNA/RNA-binding protein Alba 1 15 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04225 Trre-Chr5 44002637 44006961 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04225 - - cam:101498857 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04225 5 44002637 44006961 Trre5g04225 5 44002637 44006961 ECH