Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04207 ATGGCTAAAGTTTTGCTAGGAATGCCGGGTCCATGGGCCGATGACTGCCGTGAACCATCTGATCATTATACTACTAAAATTGGAGGCCTCCCTGACTGGCCCATTTCCAAGGATGCCATCGATACCAATTTGCTACACTGTGCTACCTGTGCCAATGGCCTCTCTCTCGTTGCACAGGTTTATGCTCCTCTATCTTATCATCATCGCATTCTTTTCATTTTCGGTTGTGTTTCGCCCAAATGCACAACCTCTTGGCGAGTTCTTCGACTTCAGAAACTTGCTGACGTGGACACCTCTCAACATAAACAAGTTGAAGTTCAAAATCCCAACTCAGCGGACGATGAAGACGAAAGCGAAGATGACATGAGTTTTGAAGAACTGGCCAATGCACTTTATCAAGCTGGGACTTTGGCTTCTTCTAATTCTAAATCTAAGAGTAAGAAACAAAAGAAAAAGCGCCAACACAAATTCCCTACATCTTCTCCGTATCCAGAACAACCAACAGCTTCTGAAGATGTTAACAATCATAATGATATTCCAGTGGTGCCTTGCTTTTATATATACACACAGGAAGAGCCATCTACAGGGGATCTTAGTTCTGTATGTTCTAGCTACTCATCACTTTCTATTAAGGACAATGGAAATTCTGCTGAGGATAATTTGCAAGCAGAAGAAACCTGGGAAAAGGAACAATATGAATATGATAAAGCTTTGACAGCTGATAGAACATACCTCAAGTTCAAGAAACGGTTGGATGCATATCCTGAGCAGTGTTTTAGATATTCGCATGGTGGCAAGCCAGTTTTAGCTGTAGCTAATGAAATAAACCCTGGAAGTTGCGGGCTCTGTGGCAAACCAAGGCAATTTGAGATGCAGTTAATGCCCCCATTACTATACTTTCTACAGGAAGCACTTGCTGACAACCAAAGACAGATGGTTGAAAATTGGGATTGGATGACCCTTCTGGTATATACTTGTCCTGAGAGTTGTTGTGAAGATAAACAAGTGAACTCCAATAGCAATGGCTGGATCATAGCAGAGGAAGCTGTTGTAGCTCAATGTGAGGAGTCAATGCCCGTTCAACTGGGCTATTTCTCATGA 1101 0.426 MAKVLLGMPGPWADDCREPSDHYTTKIGGLPDWPISKDAIDTNLLHCATCANGLSLVAQVYAPLSYHHRILFIFGCVSPKCTTSWRVLRLQKLADVDTSQHKQVEVQNPNSADDEDESEDDMSFEELANALYQAGTLASSNSKSKSKKQKKKRQHKFPTSSPYPEQPTASEDVNNHNDIPVVPCFYIYTQEEPSTGDLSSVCSSYSSLSIKDNGNSAEDNLQAEETWEKEQYEYDKALTADRTYLKFKKRLDAYPEQCFRYSHGGKPVLAVANEINPGSCGLCGKPRQFEMQLMPPLLYFLQEALADNQRQMVENWDWMTLLVYTCPESCCEDKQVNSNSNGWIIAEEAVVAQCEESMPVQLGYFS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04207 366 MobiDBLite consensus disorder prediction 98 122 - -
Trre5g04207 366 PANTHER OSJNBB0079B02.4 PROTEIN 1 358 - -
Trre5g04207 366 MobiDBLite consensus disorder prediction 136 175 - -
Trre5g04207 366 MobiDBLite consensus disorder prediction 159 175 - -
Trre5g04207 366 Pfam Programmed cell death protein 2, C-terminal putative domain 241 353 IPR007320 GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04207 Trre-Chr5 43743721 43746545 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04207 K14801 - gmx:100796380 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04207 5 43743721 43746545 Trre5g04207 5 43743721 43746545 ECH