Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04200 ATGGACCAAAATAAGGAGAAAAATGGGCCTTGGCTATCAGTTCCAGCATTTGGGGACTGGGATCAGAAGGGTCCAGTGCCGGACTATTCGATGGATTTTTCTAAAATTCGGGAAATGAGGAAGCAAAATAAGACAAATCTTTCAAGAGCAAGTCTTGGAAATGAGGAGGAGTTGGTGGCCAATTCTACCAAAACAAATACTATTAACACCGATAACAATGAGCGTCAGCACCCGCATTACCACCAAACTGACTCTCCAGTTACAAGGAGGAGCTTCCTGAGCTACTTCAACTGTTGTATAAAAGCATGA 309 0.4304 MDQNKEKNGPWLSVPAFGDWDQKGPVPDYSMDFSKIREMRKQNKTNLSRASLGNEEELVANSTKTNTINTDNNERQHPHYHQTDSPVTRRSFLSYFNCCIKA 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04200 102 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN 1 101 - -
Trre5g04200 102 MobiDBLite consensus disorder prediction 66 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04200 Trre-Chr5 43685609 43688193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04200 - - gmx:100796591 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04200 5 43685609 43688193 Trre5g04200 5 43685609 43688193 ECH