Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04176 ATGGAGGGTCATAGGCCCACTCTTCCAGCCCACCAAGCCCACACAAAGCCCATCTCTCGTCTTAACTCCTACGTAGCCAAAACTAGAGTAGGTAAATATTTCAAGCTCTCCCAAAGAAATTCCACCTTCACGACGGAGCTTCGTGCCGGAACTGCCACTTTTCTCACCATGGCTTATATCCTCGCCGTCAACGCTTCCATTTTAACGGATTCAGGTGGAACATGTTCTGTTTCAGATTGTGTTCCTCTATGTTCTGACTCTTCAGTTTCGATCACCAACTGTTCAGGCTCATCACTTCGTGTCATTCAGCCTGATATTTCTTGCAAATTCGACCCGGTTAACCCCGGTTACGCCGCGTGTCTCGATAAAACCCGAAAAGACTTGATCGTTGCCACTGTAGCTTCTTCTCTCATTGGTTGTTTCATTATGGGTGCTTTTGCTAATCTTCCATTGGGCCTTGCTCCGGGTATGGGCTCTAATGCTTACTTTGCTTATACAGTCGTGGGCTTTCATGGTTCCGGTTCAATTTCCTACCAAAACGCACTCGCCGCTGTTTTCATTGAAGGAATGGTTTTCTTATTCGTTTCATCAATAGGTTTACGAGCAAAACTCGCTAAACTTGTTCCAAAGCCCGTTAGAATAAGCTCCTCAGCTGGAATTGGGCTTTTTCTTGCTTTCATCGGGCTTCAAAATAATCAAGGAATTGGGCTTGTCGGGTATAGCTCTTCCACTTTAGTAACCCTCGGTGGCTGCCCAAGCTCATCACGGGCTTCCTTAGCTCCCGTTATAACGGCGCTTAACGGCACGGTTAGTCTTCTCCCTGGCGGAACGGTTTCCGGCGATATATTTTGTCTCCGTAATAGAATGGAAAGCCCAACACTCTGGTTGGGCCTGGTGGGCTTTATCATAATTGCGTATTGTTTAGTGAAAAACGTTAAAGGCGCAATGATATACGGCATCGTTTTTGTAACAGCCGTTTCTTGGTTTAGAAACACTAAAGTAACGGCGTTTCCTAACAGCGACGCGGGTAACACGGCTCACGAGTATTTCAAGAAGGTAGTTGACATACACACGATAAAAACTACGGCAGGTGCGTTAAGTTTTAACAGTATAGGAAAAGGGTATTTTTGGGAAGCTGTGGTAACATTTTTATATGTCGATATTCTCGACACTACCGGAACGTTGTACTCGATGGCACGGTTCGCGGGTTTTACCGATGAGAAAGGTGATTTCGAGGGTCAATATTTCGCGTTTATGTCGGATGCCACGTCGATTGTTGTGGGGTCGTTATTGGGAACTTCGCCGGTGACGGCATTTATCGAGAGTTCTACGGGGATACGAGAAGGTGGACGGACGGGGATAACCGCGTTGACGGTTGCAGGTTATTTTTTTATGGCGTTGTTTTTTACGCCGTTGTTGGCTTCGATTCCGGCATGGGCGGTAGGACCGCCGTTGATTTTGGTGGGAGTTTTGATGATGAGATCAGTGGTTGAGATTGATTGGGAAGATATGAGACAAGCAATACCTGCGTTTGTGACAATGATACTTATGCCTTTGACGTATTCAATTGCTTATGGGCTTATTGGTGGGATAGGTACTTACATTGTGTTGAACATTTGGGATTGGGGGATTGAGATTTTGGGGCACTTTGGGTTCCTTACAACAAAGGAGCATAGTAGTGATAATAATAATTCTCATTCTCCTCAAGTCAATGGAGTGGTTCAAAATCAACATTCTTCGCAAAATCCAAATGCTAAAGCACTACAACTTGAAGTACTTTAG 1782 0.4529 MEGHRPTLPAHQAHTKPISRLNSYVAKTRVGKYFKLSQRNSTFTTELRAGTATFLTMAYILAVNASILTDSGGTCSVSDCVPLCSDSSVSITNCSGSSLRVIQPDISCKFDPVNPGYAACLDKTRKDLIVATVASSLIGCFIMGAFANLPLGLAPGMGSNAYFAYTVVGFHGSGSISYQNALAAVFIEGMVFLFVSSIGLRAKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLVGYSSSTLVTLGGCPSSSRASLAPVITALNGTVSLLPGGTVSGDIFCLRNRMESPTLWLGLVGFIIIAYCLVKNVKGAMIYGIVFVTAVSWFRNTKVTAFPNSDAGNTAHEYFKKVVDIHTIKTTAGALSFNSIGKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDEKGDFEGQYFAFMSDATSIVVGSLLGTSPVTAFIESSTGIREGGRTGITALTVAGYFFMALFFTPLLASIPAWAVGPPLILVGVLMMRSVVEIDWEDMRQAIPAFVTMILMPLTYSIAYGLIGGIGTYIVLNIWDWGIEILGHFGFLTTKEHSSDNNNSHSPQVNGVVQNQHSSQNPNAKALQLEVL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04176 593 Pfam Permease family 123 526 IPR006043 GO:0016020|GO:0022857|GO:0055085
Trre5g04176 593 MobiDBLite consensus disorder prediction 558 584 - -
Trre5g04176 593 PANTHER XANTHINE/URACIL PERMEASE C887.17-RELATED 18 558 IPR045018 GO:0015205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04176 Trre-Chr5 43372701 43374482 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04176 K06901 - gmx:100788148 1026.16