Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04172 ATGGGTGACGGGGAAAAATTTCAGCTTGGAACTATCGGTGCATTGAGTTTATCTGTGGTTTCATCGGTGTCGATTGTGATTTGTAACAAGGCGTTGATGAGTACGCTGCATTTCATCTTTGCTACAACTTTGACAAGTTGGCATCTTCTTGTTACATTTTGTTCTCTTCACGTGGCATTGAAAATGAGATTTTTTGAGCACAAGCCTTTTGAGCAGAAAGCTGTAATGGGATTTGGAATTCTAAATGGAACCTCAATTGGACTTTTAAATTTAAGTCTCGGTTTCAATTCGGTTGGCTTTTATCAGATGACTAAGCTCGCAATAATTCCATGTACTATTCTACTAGAGATCATTTTCCTTGGCAAGAAATTCAGTAGAAGAATACAATTTTCTCTTGCAATCCTCCTTTTGGGTGTTGGAATTGCAACAATTACAGATTTGCAACTTAATGCATTGGGATCTTTCTTATCTATTCTAGCAATAATAACTACGTGTGTTGCTCAAATTATGACAAATACCATCCAAAAAAAGTTTAAAGTTTCTTCTACTCAACTTCTATATCAATCATGTCCATATCAAGCAGCAACATTATTGTTAACCGGACCATATTTGGACAAAATTCTTACTGACCTAAATGTTTTTGCTTTCAAGTACACAACACAAGTAACGTTTGCCATTGTTCTTTCATGCCTTATTTCTATCTCAGTAAATTTTAGTACATTTCTTGTAATTGGAAAAACATCTCCAGTTACCTACCAAGTTCTTGGACATCTTAAGACATGTCTTGTATTGGCTTTTGGTTACATTATTGTCCGTGACCCTTTTAGTTGGAGGAATATATTGGGAATTTTGGTAGCAATGGTTGGGATGATTCTATATTCCCACTCTTGCATAATTGAGAATCAACAAAAGGCAGCTGAAACTCCAATACAAGTATCACAGACAAGAGAAGGTGAATCTGATCCTCTCCTTAACGTGGAGAGTGGAGGAAATACAATACTGAACAAAAGGCCCCCTATTTGGAGCAAGGAAAAAGACTAA 1041 0.3631 MGDGEKFQLGTIGALSLSVVSSVSIVICNKALMSTLHFIFATTLTSWHLLVTFCSLHVALKMRFFEHKPFEQKAVMGFGILNGTSIGLLNLSLGFNSVGFYQMTKLAIIPCTILLEIIFLGKKFSRRIQFSLAILLLGVGIATITDLQLNALGSFLSILAIITTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQAATLLLTGPYLDKILTDLNVFAFKYTTQVTFAIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYIIVRDPFSWRNILGILVAMVGMILYSHSCIIENQQKAAETPIQVSQTREGESDPLLNVESGGNTILNKRPPIWSKEKD 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04172 346 MobiDBLite consensus disorder prediction 313 332 - -
Trre5g04172 346 MobiDBLite consensus disorder prediction 313 346 - -
Trre5g04172 346 PANTHER SOLUTE CARRIER FAMILY 35 12 295 - -
Trre5g04172 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 294 - -
Trre5g04172 346 Pfam Triose-phosphate Transporter family 21 294 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04172 Trre-Chr5 43343544 43346865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04172 22 325 Organic Solute Cotransporters AT1G77610 24.127 6.66e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04172 K15285 - gmx:100788989 594.349