Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04154 ATGGTGGGCCCACAGTACGATCTTCTCGCTAACCCGCTCGGTGCCGTCAGATCCACCTTCGACACCGCCATATCCTCCGGTTCCGATCCAACCTCTTTAAACGGCCGTGACTGGGGCGCCGTTGATCTCTTCCGCCACTTACTTTCCGATCAATCACAACTCTCTCAGGTTCCGCTTCTTACCCCATCCACTATCAGATACATCAAGCCCAATACTCTTGTTCGCTATCGTGGTATGATTCAGGACATGCTCGGAAATGAATTTTATGTTGGCGTTTACAAGGATGGTTCGGTGTGGAGGACTAATAAATTTACGGATATTTCTCAATATCCTATTCCTATGGATTCCTCTGCTGAGACGCGGATCTGGGAACGCCGATTGCTTTACTGTGTTCCAGTTCCGGGACTGAATTCGTGGGCAGAACCTTCATCGGAGGCAGTTGGCAATCTATCTATGGATTGGGCATCCGAACAAAGAGAAAAGCGAAGGAGAGGAGATGATGAGTCTTCTGACATGCCTGTTGATGGTGATGAGGTGGAGGGCTCTCCTAATACTAAAAGAATGAGAGAAGGTGAACACCCTTCCCTTGCTTCTCAGCCTCAGGGACCTGTACCTGAGATTGCTAGCTCTAGTACGAGTTTAATGCCTGGTCTCAATGGTAACTCATCTAGTTGTATTGTGAAGATATATGATGCGCCAGAGTCTGAACTGAAGCTGAATGACATTTTTGAGTTTGTGGGTATCCTTACATCTGATCCAGAGCTTCAGGAGGACAATGCAGATACTGATTTATCAAATGGATTTGGTGAAGACCCCTTGCATCATTTCCCACCTAACAAGGTGCCACGTCTTCATTGTTTGATTCACAGGAAACTTTCGGTTCTGGACTTCCTTCAGAATAAGCCTGTTATAGAGCCGAAACCCGACTTGGTCAGAGGTACCAGAGAGGCTCTTTTAAGACATCTCTCAGCTGTTCTAGGCAATGATGATGTAGCTGCTCATTTCATGTTGTTGCATCTCCTATCCAAGGTGCAAGCTAGGGTAGATGCTCTTGCTGTGGGAAAGTTCTCAGTAAATTTTACTTGTTTTAGCAAAGAAACTGCGTCTATATTCGGAAAGCAACTAAACCTTGCTGTCAAGAACCTCGTACCTTTCACACATTGCATACCCCTTACAGTGGAATACTTGAACACTGCTTCTCTTGCACCAAAAAAGAATTATGATACAAATAGATTAGAAACTGGAGTCTTGCAACTAGCGGAAGATTCTCATTTGATTGTTGATGAGACACAATTAGACGTTGGAACTCTCAATTCTGTAGGTGTAGAGAATGCAAGGTTGCTGAAAAATTTAATGGAGTTGCAAAAGGTGGAATATGATTTCAAGTACTATAAAATGGAAATGGCAACTGATGTCCAGCTGCTAGTTCTGTCTGAGGGGAAATCAAATATCTTGCCAGCTGATGTAATTGTACCTATCCGGCCTTCTACAACCAATTGCTCAGAAGCTGTCGCAGCAGAAAATTTGGAAGCTTGGAGGTGGTATTTAGCTAGTGTTCGACAACTGCCGCACAGTTTTGAATCAGAAACACAGAAGATGGTAGAAAGTGATTTAGTTGCCGCAATACAAGCAGATAGGAGCTTGAATACCCAAGATTTAAGCAGATTGGTAACAATGGGTCGCCTGATGTGCTTAAGCTTTGGTGAGACCACCATGTCACTAGAACATTGGCAAATGGCCAAGGAATTGGAGAGACTCCGCAGAGAGAGGTTAAAGTGA 1779 0.4446 MVGPQYDLLANPLGAVRSTFDTAISSGSDPTSLNGRDWGAVDLFRHLLSDQSQLSQVPLLTPSTIRYIKPNTLVRYRGMIQDMLGNEFYVGVYKDGSVWRTNKFTDISQYPIPMDSSAETRIWERRLLYCVPVPGLNSWAEPSSEAVGNLSMDWASEQREKRRRGDDESSDMPVDGDEVEGSPNTKRMREGEHPSLASQPQGPVPEIASSSTSLMPGLNGNSSSCIVKIYDAPESELKLNDIFEFVGILTSDPELQEDNADTDLSNGFGEDPLHHFPPNKVPRLHCLIHRKLSVLDFLQNKPVIEPKPDLVRGTREALLRHLSAVLGNDDVAAHFMLLHLLSKVQARVDALAVGKFSVNFTCFSKETASIFGKQLNLAVKNLVPFTHCIPLTVEYLNTASLAPKKNYDTNRLETGVLQLAEDSHLIVDETQLDVGTLNSVGVENARLLKNLMELQKVEYDFKYYKMEMATDVQLLVLSEGKSNILPADVIVPIRPSTTNCSEAVAAENLEAWRWYLASVRQLPHSFESETQKMVESDLVAAIQADRSLNTQDLSRLVTMGRLMCLSFGETTMSLEHWQMAKELERLRRERLK 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04154 592 Pfam Mini-chromosome maintenance replisome factor 44 591 IPR019140 -
Trre5g04154 592 MobiDBLite consensus disorder prediction 202 216 - -
Trre5g04154 592 MobiDBLite consensus disorder prediction 150 216 - -
Trre5g04154 592 MobiDBLite consensus disorder prediction 155 170 - -
Trre5g04154 592 PANTHER UNCHARACTERIZED 5 591 IPR019140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04154 Trre-Chr5 43186323 43190536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04154 - - aprc:113852715 951.814