Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04148 ATGATACCACTTGTGAGAAAGTCACAACAACTAACTATGGCTAGTGAAACAATTTTGGTTGATGAAATCTCTTACCCTTCCAAGATCACTACTACCAAGCCTCTTTCTCTCCTTGGTCATGGGATTACCGACATGGAGATCCATTTTCTGCAAGTGAAATTTTATTCAATTGGGGTTTATTTGGAACCTGAAGTAGTAAGCCACTTGCAACAATGGAAAGGTAAACCTGCCAAGGAGTTGGAAGGCAGTGATGACTTCTTTGATGCTCTCATTTCTGCTCCTGTCGAGAAGGTAATCAGACTTGTGGTGATTAAAGAGATTAAGGGTGCACAGTATGGTCTTCAGGTTGAAACTGCCGTGAGGGACCGTTTGGCAGCTGATGACAAATACGAGGATGAAGAAGAAGAAGCTTTGGAAAAAGTAGTTGAATTTTTCCGGTCTAAATACTTCAAGAAAAACTCAGTCATCACATATCATTTTCCTGCAAATTCTACAACTGCTGAGATTGCGGTGTCTTTGGAGGGAAAAGACGACACAAAGTATGTAATAGAGAATGCCAATGTGGTAGAGACAATCCAGAAATGGTACCTTGCTGGCTCAAGGGCTATATCTCCTTCAACCATTTCATCTTTGGCTGCAAATCTCGCGGAGGAATTGTCCAAGTGA 666 0.4159 MIPLVRKSQQLTMASETILVDEISYPSKITTTKPLSLLGHGITDMEIHFLQVKFYSIGVYLEPEVVSHLQQWKGKPAKELEGSDDFFDALISAPVEKVIRLVVIKEIKGAQYGLQVETAVRDRLAADDKYEDEEEEALEKVVEFFRSKYFKKNSVITYHFPANSTTAEIAVSLEGKDDTKYVIENANVVETIQKWYLAGSRAISPSTISSLAANLAEELSK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04148 221 Gene3D - 25 196 IPR016088 -
Trre5g04148 221 PANTHER CHALCONE--FLAVONONE ISOMERASE 3-RELATED 13 221 IPR044191 -
Trre5g04148 221 Gene3D - 65 216 IPR016089 -
Trre5g04148 221 SUPERFAMILY Chalcone isomerase 17 220 IPR036298 GO:0016872
Trre5g04148 221 Pfam Chalcone-flavanone isomerase 22 216 IPR016087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04148 Trre-Chr5 43157895 43160263 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04148 K01859 - gmx:732547 323.939