Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04120 ATGAAATTTGGAGTCCATCATCTCTTGTCTCTCTCGTATTCAGAATCAGAGATGGATGATACTAGCAATTCTGATGAATGTTTTGACAGTGAGAATGTATTGGTGAAATCTGAAAATCAGCCTCTCGATATTGACTTGCCACTTACCTCTGATGGTGATAATAGCTCTGTGGCTTCTATGAATGAGGATTGTGAATCACGTTTATCATCTTGGGATTCTGAACCTGAAACTGATATCCCGTCTTTAATCAATTGCCATGACATGCCTAAGGAACCCCTTGAATTAGGCGTTAAGCTGGAAGAGAACTATCTTGATATCGAAGAACAAAACAAGTTTGTTGGAGTCGAAAACACGGATGATGGTTTATTGTGGGAGATGGACAATAGAAGTTATGAAGAGTTGCTCAAAAAGTTCATAGAAAAGGAGGAAGAGCTCAGAGTTTCCAATTTTAAGCTTCAATTTTCGGAACAAGAGATTATTAAGTTGAAGATTCAAACTGAGAATAGTGATGCTCAGCTTGATAATGTGCGCGAAGAATTGAAGCTGAAAGAGAAGGAACTGAATAAACAAAAAGAGCTTTCAGAAGAAGAGATTTTCAAGTTGAAGATTCAAACTGAGAATAGTGAGGCTCAGCTTGATAATGTGCGCGAAGAATTGAAGCTGAAAGAGGAGGAGCTGAATAAACTAAAAAAGCTTTCGGAAGAAGAGATTTTCAATTTGAAGATTCAAACTGAGATTAGTGAGGCTCAGCTCGGTAATCTGCGCAAAGAATTGAAGCTGAAAGAGGAGGAACTGAATAAACTAAAAGCTAGGGAGTTAGTTTCAACTAGAAAACAAATTAAAATGGTAGTAGATGCAGCTAACCATGAGCAAGAGATGCAAAAATTGAAGTCTGAAATGCTTGATTTGCAAGATAAGTTCTCATTGGAGAAAGATAAGCTGCATTTTGATATTGCAAGTTTGTCAAAAATGAAAATAGAGTTGGCCTCTAAACTGGAGGATTTTCAGTCTAGAAACAAGGAATTAGAAAACAAATTAAGTCGAGACAGAGATGCAATAGTTGAAAAAGAAATGGTTTTGGAAGAAGAAATGAATTGTTTGAAGGAAGAACTTGGTCAGAATATGCATCTTGTAGAAGCTGGGAGAAAGGAATTGGAGATGGCAGTGATTGAAAGGGATGAAGCAAATGCCAAGATTGAGAAGCTTGAGACTGAGATATGTTCCTGCAATGATAAATTGAAGTTGCATGCTACTCAACAAATGGTTTTGCAAGACAAACTCAATTGTTTGAGGGAAGAACTTGGTCAGAAAATTCATCTTGTTGTAGCTGTGAATAAGAAAATGAAGATGGTAGTGATTGAAAGGGATGAAGCAAATGCTAAGATTGATAAGCTTAAGAATGATATACGTTCATGTGAAGATAAATCAGCAAATATGTACAATTACGTTAAAGAGCTTGAAGCATCACTGACGGATATGACGGTCATCTATAAAGCTTATCGGGATGAAGGAAAAGTGTTGAAACTGAGATTGGAAGAACAACTTAAAAAAGTGATATCAGATAAGAATGAGGAGAAGAGGGAGGCAATTAAAGAGCTCGAAGCATCACTGACGAAGATGACGGTCAGCTATAAAGCTTATCGGGATGAAGGAAAAATGTTGAAACTGAGATTGGAAGAACTTAAAGAAGTGATATCATATAAGGATGAGGAGAAGAGGGAGGCAATTAGACAGCTATGCTATTCACTTGAGTACTATAGAAGTGGATATCGTGAACTTGTTCAAGCGATTAATAAGGTTTATAGGCGTCGCTAG 1815 0.3702 MKFGVHHLLSLSYSESEMDDTSNSDECFDSENVLVKSENQPLDIDLPLTSDGDNSSVASMNEDCESRLSSWDSEPETDIPSLINCHDMPKEPLELGVKLEENYLDIEEQNKFVGVENTDDGLLWEMDNRSYEELLKKFIEKEEELRVSNFKLQFSEQEIIKLKIQTENSDAQLDNVREELKLKEKELNKQKELSEEEIFKLKIQTENSEAQLDNVREELKLKEEELNKLKKLSEEEIFNLKIQTEISEAQLGNLRKELKLKEEELNKLKARELVSTRKQIKMVVDAANHEQEMQKLKSEMLDLQDKFSLEKDKLHFDIASLSKMKIELASKLEDFQSRNKELENKLSRDRDAIVEKEMVLEEEMNCLKEELGQNMHLVEAGRKELEMAVIERDEANAKIEKLETEICSCNDKLKLHATQQMVLQDKLNCLREELGQKIHLVVAVNKKMKMVVIERDEANAKIDKLKNDIRSCEDKSANMYNYVKELEASLTDMTVIYKAYRDEGKVLKLRLEEQLKKVISDKNEEKREAIKELEASLTKMTVSYKAYRDEGKMLKLRLEELKEVISYKDEEKREAIRQLCYSLEYYRSGYRELVQAINKVYRRR 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04120 604 Coils Coil 325 370 - -
Trre5g04120 604 Coils Coil 508 578 - -
Trre5g04120 604 Coils Coil 448 475 - -
Trre5g04120 604 Coils Coil 385 405 - -
Trre5g04120 604 Coils Coil 159 236 - -
Trre5g04120 604 MobiDBLite consensus disorder prediction 39 59 - -
Trre5g04120 604 Coils Coil 244 271 - -
Trre5g04120 604 Coils Coil 286 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04120 Trre-Chr5 42888083 42890869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04120 393 594 EF-hand Containing Proteins AT5G05180 24.893 7.17e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04120 - - tpra:123914970 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04120 5 42888083 42890869 Trre5g04120 5 42888083 42890869 ECH