Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04048 ATGTCCCCACCGTTGCTACCACTAACAAATTCAAATCTCCCTAACTTACCAGATCTTTTACTAACTGCACTCTCCGTTTGCTTCCTCTTCACCTCCTCAAGATTCCACAACACCACAACAACAACAACAACATCAAATTGTCCTTTCTTTTCTTTCCCTCTTAACCCTCGCCGTTTTCTCAAAATCCCCGCCATGTCCCAAACTTCCACGTCATCATTATCATCAACAACAAACCCTAACAAGAATAACCGTCGTCACAGTTTCGCATCACCGCAATCTCTCTCCGAATGGTTGAAACCTCGATTACCCTCCGATTCCTTCGCTACATGGGGCGTTAAGCCTGGTACAAAGAACGTTCATAATCTATGGCTTGAACTTTCTCAAGGAGAAACCTCGCTCGCCGATTCGGAACCGCCGGTTCGAACCGTTCAGGTTGTTTTGGTTCGGGTTATCGGAAAAGACGGGAAGATTCTTGTTGAATCGCATCAGGAATTGTCTGATGGTGAAGTGAGGGAACGTGGTAGGCCGTTGTCGGAGAAGATGAAGCCGAACGAGGATCCCGAATCGGCTGCGGTTAGAGGGATTAAGGAAGAGCTTGGTTCTGTGATTGATGCTGAAACGGAGGTTTGTGATATTGTAACGATTGATCCGAATTCGTATGAGATGAGAGTGGAGGAGAGGAATTCAGGTTCTTATCCTGGTTTGCCTGGTTGCTATGTTTTGCATACTTTGAATGCTACGGTGGAGGGTTTACCGGAAGGTGATTTTTGCACGTATGAGGTTGATGAGTATGGTGATTCTGAGGATAAGAAAGTTGCACATCAAGCTGTTTCTGTTAAGAAACATTATTGGAAATGGGTTAGTGCTGATTCTATTCAACCTTGA 885 0.4508 MSPPLLPLTNSNLPNLPDLLLTALSVCFLFTSSRFHNTTTTTTTSNCPFFSFPLNPRRFLKIPAMSQTSTSSLSSTTNPNKNNRRHSFASPQSLSEWLKPRLPSDSFATWGVKPGTKNVHNLWLELSQGETSLADSEPPVRTVQVVLVRVIGKDGKILVESHQELSDGEVRERGRPLSEKMKPNEDPESAAVRGIKEELGSVIDAETEVCDIVTIDPNSYEMRVEERNSGSYPGLPGCYVLHTLNATVEGLPEGDFCTYEVDEYGDSEDKKVAHQAVSVKKHYWKWVSADSIQP 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04048 294 SUPERFAMILY Nudix 139 217 IPR015797 -
Trre5g04048 294 MobiDBLite consensus disorder prediction 66 93 - -
Trre5g04048 294 MobiDBLite consensus disorder prediction 167 190 - -
Trre5g04048 294 PANTHER RING-H2 ZINC FINGER PROTEIN 10 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04048 Trre-Chr5 41997594 41998478 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04048 - - mtr:11440451 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04048 5 41997594 41998478 Trre5g04048 5 41997594 41998478 ECH