Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03997 ATGGCCAAATTTCGATCACAAAGACAATTTCCAAGGCTAGGACTAGGAAGAGTGAGAGCTCAAGCTAATGATGATAACAAAGACAATTCTGTTGAAGTTCAACATGTTAACAAAGACAATCAAGGTACCGCCGTAGAGAGGAAGCCTCGCCGAGGTAGTTCCATCGACATTTCACCATTTGGTTTATTGGATCCATGGTCACCTATGAGGAGCATGCGTCAAATGCTAGACACAATGGACAGAATTTTCGAAGACGCGATGACATTTCCCGGAACAAATCTTGGAGTTGGAGGTGGCGAGATTCGTGTTCCTTGGGACATCAAAGATGAAGAACAAGAAATCAAAATGCGTTTTGATATGCCTGGTCTTTCCAAAGAAGATGTTAAAGTATCAGTTGAGGATGATGTTCTTGTTATAAAAAGTGATGTTAAGAAAGAGGAAAGTGGTGAAGAAGATTCTTGGTCAAGAAAGAGCTATAGTTCTTATGATACAAGACTCAAGCTTCCTGTTAACTGTGAGAAGGATAAGGTTAAGGCTGAGTTGAAAAATGGTGTGCTTTATATTAGTGTTCCTAAGACTAAAGTTGAACACAAGGTTATTGATGTTCAAATTCAGTGA 618 0.3948 MAKFRSQRQFPRLGLGRVRAQANDDNKDNSVEVQHVNKDNQGTAVERKPRRGSSIDISPFGLLDPWSPMRSMRQMLDTMDRIFEDAMTFPGTNLGVGGGEIRVPWDIKDEEQEIKMRFDMPGLSKEDVKVSVEDDVLVIKSDVKKEESGEEDSWSRKSYSSYDTRLKLPVNCEKDKVKAELKNGVLYISVPKTKVEHKVIDVQIQ 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03997 205 MobiDBLite consensus disorder prediction 1 53 - -
Trre5g03997 205 FunFam 26.5 kDa heat shock protein, mitochondrial 61 204 - -
Trre5g03997 205 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 10 205 IPR044587 GO:0009408
Trre5g03997 205 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 96 205 IPR002068 -
Trre5g03997 205 SUPERFAMILY HSP20-like chaperones 68 204 IPR008978 -
Trre5g03997 205 CDD ACD_sHsps-like 106 192 - -
Trre5g03997 205 Gene3D - 62 205 IPR008978 -
Trre5g03997 205 Pfam Hsp20/alpha crystallin family 106 205 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03997 Trre-Chr5 41184708 41185571 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03997 K13993 - gmx:548078 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03997 5 41184708 41185571 Trre5g03997 5 41184708 41185571 ECH