Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03915 ATGGCGATGGAAGTTACTCAGGCACTTTTGAATGCTCAATCCATTGATGGGACTGTACGTAAGCATGCTGAAGAAAGTCTGCGGCAGTTTCAGGAGCAAAACCTTCTAGGTTTCTTGGTCTCTCTTTCCGGAGAGTTAGCAAGTGAAGATAAACCAGTTGATAGCCGAAAGTTGGCAGGTTTGATACTTAAAAATGCATTGGATGCCAAGGATGAAAACAGAAAGCGAGAATTGGTTCAGAGATGGTTGTCATTGGACTCTGCAGCAAAGGGCCAAGTTAAGGCATGCTTGCTGCAAACACTCTCTTCTCTTGTACTTGAGGCTCGGTCTACAGCAACTCAAGTTGTTGCCAAAATTGCTGGAATTGAGCTTCCTCAGAAACAGTGGCCTGAGCTGATAGGATCACTTTTATCAAATATTCATCATGTTCCTGCTCACGTCAAGCAAGCATCTTTGGAGACTCTAGGGTATTTGTGTGAAGAGGTCTCTCATGAGGTTGTTGATCAAGACCAAGTAAATAAAATTCTTACTGCTGTAGTTCAAGGTATGAATTCATCTGAAAAGAACAATGACGTAAGACTTGCTGCTACTAGGGCATTATATAATGCTCTTGGATTTGCACAGGCTAATTTTAGCAATGATATGGAGCGTGAATACATCATGAGAGTTGTTTGTGAGACAACTATGTCTCCTGAAGTGAAAATACGACAAGCAGCTTTTGAATGTTTGGTCTCAATTGCTGCCATGTATTATGTAAAGCTGGCTCCTTACATCCAGGATATATATAACATCACAGCAAAGGCAGTTAGAGGTGATGAGGAGGCTGTTGCTCTCCAAGCCATTGAATTCTGGAGTACGATTTGTGATGAGGAGACTGATATCTTGGAAGAATATGTGGGTGATACCACAGGGGACTCTGATATACCTTGTTTTTATTTCATTAAGCAAGCTCTTCCTGCTCTCATCCCTCTGCTGTTGGAAACATTACTTAAACAAGAAGAGGATCAAGATCTGGATGAAGGTGCATGGAATATTGCAATGGCAGGTGGTACATGCCTTGGTTTAGTTGCTCGTACTACTGGAGATGATATTGTGCCGCTGGTAATGCCCTTCATTGAGGAGAACATTACAAAACCAGATTGGAGACAGAGGGAAGCAGCCACTTATGCATTTGGCTCTATCTTGGACGGGCCTTCCCCAGACAAATTAGTACCTCTTGTTAATCACGCTCTTCCGTTTATGCTCAGTGCTCTAGTGAAGGATCCAAGTAACCATGTTAAAGACACCACTGCTTGGACTTTGGGACGAATGTTTGAATTTCTTCACAGTTCAATTGTTGGCACACCTATTATTAATGAGGGAAATGCCCAACAAATTATTTCAGTTCTCCTTCAGAGCATGAAGGATGTACCTAATGTTGCTGAGAAAGCCTGTGGAGCCCTGTATTTTCTTGCCCAGGGTTACGAGGATGTGGGGCTAACATCTCCTATAACTCCCTTTTTCCAGGAAATTGTTCAAGCCCTTCTCACTGTTACCAAAAGAGAGGATGCTACAGAATCACGATTAAGAACTGCAGCATATGAAACATTGAATGAAGTAGTAAGATGTTCAACAGATGAAACAGCTCCTTTGGTGGTACAACTAGTTTTGGTCATCATGACGGAGCTGCACAAATGTCTTGAAGCACAAAATCTCTCTTCTGGTGAAAGAGAAAAACAGAGTGAACTTATAGGCCTTCTTTGTGGGTGCTTGCAAGTAATTATTCAGAAGCTAGGGTCTTCAGAACATACCAAATATGGTTTCTTGCAGTATGCTGATCAGATAATGGGACTATTCATCAGGGTCTTTGCTTGTAGAAATGCCGCTGCCCATGAGGAAGCCATGCTAGCTATTGGAGCCCTTGCCTATGCAATAGGCCCTGATTTTGCTAAATACCTGCCTGAATTTTACCAGTTTCTAGAGGCTGACCTTCAGAATTTTGAGGAGTACCAAGTTTGTGCCGTAACTGTTGGTGTAGTTGGCGACATATGCAGGGCATTGGAGGATAAAATACTGCCTTACTGTGATGGGATTATGACACAACTTCTCAAAAATTTGTCAAGTGATAACTTGCACCGTTCTGTGAAGCCCCCACTATTTTCATGCATTGGTGATATAGCACTTGCTATAGGAGACAACTTCAATAAGTACTTAATGTATGCAATGAACACACTACAAATTGCTGCAGAGATGTACGCACACACATCGGGCTTTGACTTGGAAATGACAGAGTACATTAACTCTTTGAGAAATGGGATATTAGAGGCATATTCTGGGATCTTCCAAGGGTTTAAGCATTCATCAAAAACGCAGCTCTTGATTCCTTATGCTTCTCACATCCTCCAGTTCTTGGATAGCATATACATGGAAAAAGACATGGATGACGTGGTTATGAAAACAGCTATTGGAGTCCTTGGAGATCTAGCTGATACACTTGGAAGCAATGCCAGTTCTATAATTCAACAGTCTTTGTCAAGCAGAGACTTTTTAAATGAATGTTTAACCTCAGACGATCATATGATCAAAGAATCTGCTGAATGGGCCAAGTTGGCTATCAGTCGCGCTATATCTGTTTGA 2616 0.4186 MAMEVTQALLNAQSIDGTVRKHAEESLRQFQEQNLLGFLVSLSGELASEDKPVDSRKLAGLILKNALDAKDENRKRELVQRWLSLDSAAKGQVKACLLQTLSSLVLEARSTATQVVAKIAGIELPQKQWPELIGSLLSNIHHVPAHVKQASLETLGYLCEEVSHEVVDQDQVNKILTAVVQGMNSSEKNNDVRLAATRALYNALGFAQANFSNDMEREYIMRVVCETTMSPEVKIRQAAFECLVSIAAMYYVKLAPYIQDIYNITAKAVRGDEEAVALQAIEFWSTICDEETDILEEYVGDTTGDSDIPCFYFIKQALPALIPLLLETLLKQEEDQDLDEGAWNIAMAGGTCLGLVARTTGDDIVPLVMPFIEENITKPDWRQREAATYAFGSILDGPSPDKLVPLVNHALPFMLSALVKDPSNHVKDTTAWTLGRMFEFLHSSIVGTPIINEGNAQQIISVLLQSMKDVPNVAEKACGALYFLAQGYEDVGLTSPITPFFQEIVQALLTVTKREDATESRLRTAAYETLNEVVRCSTDETAPLVVQLVLVIMTELHKCLEAQNLSSGEREKQSELIGLLCGCLQVIIQKLGSSEHTKYGFLQYADQIMGLFIRVFACRNAAAHEEAMLAIGALAYAIGPDFAKYLPEFYQFLEADLQNFEEYQVCAVTVGVVGDICRALEDKILPYCDGIMTQLLKNLSSDNLHRSVKPPLFSCIGDIALAIGDNFNKYLMYAMNTLQIAAEMYAHTSGFDLEMTEYINSLRNGILEAYSGIFQGFKHSSKTQLLIPYASHILQFLDSIYMEKDMDDVVMKTAIGVLGDLADTLGSNASSIIQQSLSSRDFLNECLTSDDHMIKESAEWAKLAISRAISV 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03915 871 SUPERFAMILY ARM repeat 3 861 IPR016024 -
Trre5g03915 871 SMART IBN_N_2 23 103 IPR001494 GO:0006886|GO:0031267
Trre5g03915 871 Pfam Importin-beta N-terminal domain 23 102 IPR001494 GO:0006886|GO:0031267
Trre5g03915 871 FunFam Importin subunit beta-1 3 871 - -
Trre5g03915 871 PANTHER IMPORTIN BETA 6 843 IPR040122 GO:0006606
Trre5g03915 871 Pfam HEAT-like repeat 381 437 - -
Trre5g03915 871 Gene3D - 1 871 IPR011989 -
Trre5g03915 871 ProSiteProfiles Importin-beta N-terminal domain profile. 23 103 IPR001494 GO:0006886|GO:0031267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03915 Trre-Chr5 40284066 40286774 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03915 K14293 - gmx:100785130 1535.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03915 5 40284066 40286774 Trre5g03915 5 40284066 40286774 ECH