Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03891 ATGGGTGAGAAGGAACTTTATGTTTTGGATAGAATAATTGGGTGTGGTAGTAAGAGTGATGTTGATGGCATGTATCCTATGTATTTTGGTGTTTCTTGTGCATTTTTTGCTCTTCAAGTTCTTAGAAAATCACATGTTGAAGTTGAGAAAAATTTGACTGAAATTGTTGAAACTATGCTTCAAGGAAGTGCACAGCTTTTGGGTTTGATTGTTTGGAAAGTTCAGAAGGAAGTGTTAAATGAGGGAGAGTACCACCAAAAGCTGAAAAGTGCTAAGATAGAAATTGAGAATCTGAAAAAGATAAGACATGAAGATGCAAAAGCAAATGAGAAAGTGGTGGGGATTTTTGCTGCACAAGAACAAAGTTGGTTTAGGGAAAGAAGGAAACTTCGACAGCAAATTGGTGCTCTATTGAATGAGCTAAGAGTGTTTGAGAAAAAAAAGGATTCGGCTATCGATGAATTGAATCAGAAATTGATGGAAAGGGAGGCTATGGTGGAGTCAAAGGATAAGAAAATTGAAGAGGAGGAGAAAAAGAGAAAGGAGCTAGAAGAAAAAGTGGAAAAAGCTGAAAGGGATGCTGAAGAATTGCGAGAATCAACGAGGCGTGAAGCTCAGGAACATTCATCTGATCTCAGGAAACATAAAACTGCTTTCATTGAGCTTGTTTCAAACCAAAGACATCTTGAGGCTGAACTTGGTCGTGCCATTAAGCATTTGGATGCTACAAAACAAGAGCTTATTTCTGTCATGGAGAATAAAGAGGAGTCTGATTTGATGGTCCAGAAATTAACTTTGGAGATTGGAAAATTTCACAAGGATTTGGAACAAAAAGATAAGATTTTGTCAGCAATGCTAAGGAAATCTAAACTAGATACTGCAGAAAAGCAAATGCTGTTGAAAGAGGTTAAGTTATCAAAGACTAGGAGGAAGCAAGCTGAGCAAGAAACAGAAAAGTGGAGGGTAGTTTCAGAAGTAAAACATGACAGACATTCCCTTAAAAACATGTTGCTGAATTTTAGTTCTAGGATGGATGTTTTCCCTAGTTCTAGAGGTTTACAGCAGCATAATTCTCCAACAGGTTCTTCACACGTTTCAAATGAACAAGAACAATTTTCACCCATTTCTGATCACTACTTGCCACAAAGAAATGAAGACTCATCCATTCCAACTAATGCTAAGCGTTTGGAAGATTGGATGAGAGCTGAGACAGAAAGATATGCAACCTTGATTGAACAGAGGCATCATATAGAGCTAGATGCTTTTGCAGATCAAATGAGGATCAAAGATGAGAAGTTAGAAGCATTTAGGTGGCAGTTGTTGAGAACAGAATTAGAAACAAAGCAACTTCAGTCACATTTGGAGGGATTGGGGAAAGATGTGACACAGCTGAGACATGACAAGATGAAATTGGAGAGCTTATTGTTGGAAAGAGAGGATGAACTAACTTCCCTGAAAGACCAATTTGCATCAAAATTGAGGCCTTTAAACACTTTTCGAAATAACTCGAATTTGTCTCCACAATCTTCAGAACTAACTCAAGATCCTGTCTGGTCTAGAGTCAAGATTGTGAAGAGAAAACCAGGTGAAAAACAGCTAGAAAGGATGGAAACTTTGATTGAGGAAGTTTGTGACAAGGAGGTGCAGCAGCCCTTGAACCATGATCAGTTCGACAATGCTAATTCAAAAGTTCAATCTCCAGAAAATAAGATTGAAGAAGAAAAGCATGTTTGTAAGGAGGATAATCCTACTCCTGTGCAGTATCAAAGTCCAAATCACATAGAAACTGATGCTGCTGAAAAGTTAGGATCTACTAGCAAGCCCTTTAATGATGCAAAACAATTCCAATGGAAGATGGATCTTCATGCTCTTGGAGTATCTTACAAGATCAAGAGACTTAAGCAACAACTTATTCTTGTTGAAAGGTTGACAGGAATGCAAAACAATGATGAACATGCCGAAATTAGTGAAGATATGAAGACTTACATGTCCATGACTACTTTGCTGAATAAACAAATTGGAAGATATCAATCCCTCCAAGAGAAGACCGACGATCTTTGCAAACGGATGCAAGAGAATGTCCTCTACGCAACTCGCGGAGAAATGAATAACGCAAGATCAAAGGAGAAAACATCAACACTAGAGCATTTTTTGGAGGAGACATTTCAATTACAAAGATACATTGTTGCAACAGGACAAAAATTGTTTGAAATTCAATCCAAGATTGTTTCTGGATTTGTTGGAGTAGCAGAAGAGATGGAAAAAAATGCAGGCATTGACATGAAGAGATTTTCTGACAGTATAAGGAATCTGTTCCATGAAGTTCAAAGAGGTTTAGAAGTTCGAACGGCTAGAATTATAGGTGACCTTGAGGGAACATTGGCTCGTGAAGGAATGATATGTTTGAGAAGATAG 2415 0.3789 MGEKELYVLDRIIGCGSKSDVDGMYPMYFGVSCAFFALQVLRKSHVEVEKNLTEIVETMLQGSAQLLGLIVWKVQKEVLNEGEYHQKLKSAKIEIENLKKIRHEDAKANEKVVGIFAAQEQSWFRERRKLRQQIGALLNELRVFEKKKDSAIDELNQKLMEREAMVESKDKKIEEEEKKRKELEEKVEKAERDAEELRESTRREAQEHSSDLRKHKTAFIELVSNQRHLEAELGRAIKHLDATKQELISVMENKEESDLMVQKLTLEIGKFHKDLEQKDKILSAMLRKSKLDTAEKQMLLKEVKLSKTRRKQAEQETEKWRVVSEVKHDRHSLKNMLLNFSSRMDVFPSSRGLQQHNSPTGSSHVSNEQEQFSPISDHYLPQRNEDSSIPTNAKRLEDWMRAETERYATLIEQRHHIELDAFADQMRIKDEKLEAFRWQLLRTELETKQLQSHLEGLGKDVTQLRHDKMKLESLLLEREDELTSLKDQFASKLRPLNTFRNNSNLSPQSSELTQDPVWSRVKIVKRKPGEKQLERMETLIEEVCDKEVQQPLNHDQFDNANSKVQSPENKIEEEKHVCKEDNPTPVQYQSPNHIETDAAEKLGSTSKPFNDAKQFQWKMDLHALGVSYKIKRLKQQLILVERLTGMQNNDEHAEISEDMKTYMSMTTLLNKQIGRYQSLQEKTDDLCKRMQENVLYATRGEMNNARSKEKTSTLEHFLEETFQLQRYIVATGQKLFEIQSKIVSGFVGVAEEMEKNAGIDMKRFSDSIRNLFHEVQRGLEVRTARIIGDLEGTLAREGMICLRR 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03891 804 Coils Coil 127 147 - -
Trre5g03891 804 Coils Coil 296 316 - -
Trre5g03891 804 Coils Coil 152 207 - -
Trre5g03891 804 MobiDBLite consensus disorder prediction 348 370 - -
Trre5g03891 804 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Trre5g03891 804 PANTHER RIBONUCLEASE P PROTEIN SUBUNIT P38-LIKE PROTEIN 19 804 - -
Trre5g03891 804 Coils Coil 468 488 - -
Trre5g03891 804 MobiDBLite consensus disorder prediction 165 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03891 Trre-Chr5 39867207 39870324 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03891 - - gmx:100815082 1149.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03891 5 39867207 39870324 Trre5g03891 5 39867207 39870324 ECH