Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03889 ATGGGCGAAATCAAGATGGAGGACATGCCACTACCGGCGCTGTTCGAACAAGCAAGGAAGATCCACGCAACCGCCACAGAGTTCGGTGCTGATCAGGAGCTTGTTAAAAAGGGATGCGAAGCCCTAAATAAATGCGAAGATATGATCAATAAACTAGGTTTGTTCTCTGCTAATGAAACCAAAGAGGATATTAGCACAACCGATCTCAAGTACATTCTGGTGCCATATTATCTTGCTGAGTTGACTGAAAAAATAGCACAGGATGACAGGATACAGATTCTAAAGGCTTCCCAGGCAAAACTGAAGGAATTTATTTCATTTTGTGAGGCAATGGAGCTGGTCCCAAAAGAGGAGTTAGAATCTTATATACAAGGGGTACCAAAATCTGTTGCTGATCAGAGGGCCAGGAAGATAGCTAGATTTAAACGTCAAAAAGCTGCAGAATCAAAGTTGTTAGAAATAAAAGAGCGGAAAGAACGCCGTGGGCGTTCTACTAGAGCAGCTGCCTTGTCCACCCCCGTTGAGGCAGGAGAGGAAGAACTATTGGATGATGATGGAGAAGAAGAAAGAGAGGCTTGGAATACTAGCATATCTTTGGCGATCTGTAAGGCATTTGATCTTTTGGAAATGATTAAGAAAGAGGAAGAGATGCTTTCGGCTGTAAAGGATAGACAATCCAAGGATGGGGATCAGGAGTTTTCTAAGGATGTTATGGATGAACGTGCCAAGAAAGCAGAAGCTTGGCATCGCAATGCTGCAGTTCGTGCACAGTATACTAAGCCAACTCCACCAATTACATGTGCTACCTTCGCTCAAGATGTTCTGGAAGGAAGAGCACAAGCCTCACAGGCTCATGATCACAAACACCAACCACTTATATTTGGGCCACAAAGTCTTGTAAATGGAAGTTTTACAAATGAGAGAGAAAGAATGGCAGCTCAGGTCTTCCAACCCAGCCATAGGATGCCAACTATGAGCATTGAGGAAGCAGGACTTAAAGAAATGGAAATAATGAATAAATGGCAAGAAGACACTGCCAGATTCATGGAAGAAGCCAATTCATCTTGGCATAATGATAGGAAACTAAAGCCAGGTGAAGAGGAGGAGGATGAAGATGATGATGCTGCACAGGATAGAGCTAGAGCTTTGGATGATTGGAAGGATGATAATCCGCGGGGTGCAGGAAATTCGAAGCTTACCCCTTGTGGCTAA 1212 0.4381 MGEIKMEDMPLPALFEQARKIHATATEFGADQELVKKGCEALNKCEDMINKLGLFSANETKEDISTTDLKYILVPYYLAELTEKIAQDDRIQILKASQAKLKEFISFCEAMELVPKEELESYIQGVPKSVADQRARKIARFKRQKAAESKLLEIKERKERRGRSTRAAALSTPVEAGEEELLDDDGEEEREAWNTSISLAICKAFDLLEMIKKEEEMLSAVKDRQSKDGDQEFSKDVMDERAKKAEAWHRNAAVRAQYTKPTPPITCATFAQDVLEGRAQASQAHDHKHQPLIFGPQSLVNGSFTNERERMAAQVFQPSHRMPTMSIEEAGLKEMEIMNKWQEDTARFMEEANSSWHNDRKLKPGEEEEDEDDDAAQDRARALDDWKDDNPRGAGNSKLTPCG 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03889 403 Pfam TAP42-like family 11 391 IPR007304 GO:0009966
Trre5g03889 403 FunFam PP2A regulatory subunit TAP46 10 233 - -
Trre5g03889 403 Gene3D - 10 233 IPR038511 -
Trre5g03889 403 PANTHER IMMUNOGLOBULIN-BINDING PROTEIN 1 8 400 IPR007304 GO:0009966
Trre5g03889 403 MobiDBLite consensus disorder prediction 376 392 - -
Trre5g03889 403 MobiDBLite consensus disorder prediction 350 403 - -
Trre5g03889 403 MobiDBLite consensus disorder prediction 162 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03889 Trre-Chr5 39852871 39858851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03889 K17606 - gmx:100807894 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03889 5 39852871 39858851 Trre5g03889 5 39852871 39858851 ECH