Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03794 ATGTCAGATACACTTCGTTTAGCTGTTGCTGTTCTTGGCAATGCTGCCTCAGTCTCACTTTATGCGGCACCAATGGTTACATTTAGAAGAGTTATTAGGAAGAAAAGCACAGAGGAATTTTCATGCATTCCTTACATAATTGGATTATTAAACTGTCTTCTTTTCACATGGTATGGATTACCTGTTGTAAGCTACAAATGGGAAAATTTTCCGCTCGTAACGGTTAATGGCGTCGGAATTGCTCTTGAATTATCCTATGTTCTCATTTATTTCTGGTATTCTTCCCCCAAAGGAAAGGTGAAGGTAGCTATGATCACGACACCTGTTCTGGTTGTTTTCTGCATAACTGCAGCAGTATCAGCTTTTACCTTACATGATTCTCAACACAGAAAGTTACTTGTTGGTAGCTTAGGTTTAGGTGTTTCTGTTGCATTGTACGGTTCTCCATTGGTTGCAATGAAGAAAGTTATAGAAACAAAGAGTGTTGAATTCATGCCACTACCATTGTCTCTTTGTGCTTTCTCAGCTAGTGTTTTTTGGTTAGCTTATGGAATCCTCGTTCGTGATATATTCGTTGCGGGTCCAAGTGTGATTGGAACTCCATTAAGCATTGTGCAGCTTGTGGTTTACTTTAAATACAGGAAAGAGAGGGTTGTGGAAGAACCAAAAATTGGTGATTTAGAAAAGGGTGGGTTAGAGTTAGAGTTAGAGAAAGTGGTGGTGGTGGAGGTGGATTTGGAGAAAGTGGAAAAGATTGTCACAAATTGTGAACAATGTTAG 780 0.3936 MSDTLRLAVAVLGNAASVSLYAAPMVTFRRVIRKKSTEEFSCIPYIIGLLNCLLFTWYGLPVVSYKWENFPLVTVNGVGIALELSYVLIYFWYSSPKGKVKVAMITTPVLVVFCITAAVSAFTLHDSQHRKLLVGSLGLGVSVALYGSPLVAMKKVIETKSVEFMPLPLSLCAFSASVFWLAYGILVRDIFVAGPSVIGTPLSIVQLVVYFKYRKERVVEEPKIGDLEKGGLELELEKVVVVEVDLEKVEKIVTNCEQC 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03794 259 Gene3D - 10 105 - -
Trre5g03794 259 FunFam Bidirectional sugar transporter SWEET 7 99 - -
Trre5g03794 259 Pfam Sugar efflux transporter for intercellular exchange 10 97 IPR004316 GO:0016020
Trre5g03794 259 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016020
Trre5g03794 259 PANTHER RAG1-ACTIVATING PROTEIN 1 17 219 IPR047664 -
Trre5g03794 259 Gene3D - 133 222 - -
Trre5g03794 259 FunFam Bidirectional sugar transporter SWEET 130 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03794 Trre-Chr5 38423653 38425382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03794 1 258 Miscellaneous Gene Families AT5G53190 51.504 8.17e-98 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03794 K15382 - gmx:100813119 368.237