Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03772 ATGGAGTACGAATACAACAGAAGCAGGTCGGGTCCACAAGTTCCGATGTACCGTGCACCACCGTCCTCCTCCGCTCCCTCTTCCATCTACCCTAAGATCGGTCCTCACCCTTCCACCCCTGCCCCACCTCGTCCGTTACCCTATCAGCACAATCCCAATCCTTCTTCTTCTTCACCTTCTCTAGGGTTGGGCATTAAGGTTGCAATCAAGCCGGAATTTAGGATCGCACCGCCGCCTCATTTGTTACCACATGTGGGAGATATTCCACGGAGCAACTTCCAATTTGATTTTGGATTGGAGAGGAAAATTTTGGCCGAAGCAGAGAAGGATAACCCAAATTGGAGCAAATTCGGGATAGAAAACCTTCCAACTAAGGCTTCTGATACATCATCGTCAAAGGTTACTTCTTCAGATCCCATTGTGAGCAAATATATAGCCATGGGACTCAGCCGAGAGGCAGTTCCAATTGCTGTTACGAACTATGGTGATAATCCAACCAAAGTTAAAGAATTTGTTGATGGATACACTCTTCTGCGTGAAATGGGATTTTCATCAACTAGCGTCACCGAAGCCTTGGTAATGCATGACAACGATACAGACAAGGCGTTGGCACATTTCCTTAGTGGCTCATCATGA 636 0.4701 MEYEYNRSRSGPQVPMYRAPPSSSAPSSIYPKIGPHPSTPAPPRPLPYQHNPNPSSSSPSLGLGIKVAIKPEFRIAPPPHLLPHVGDIPRSNFQFDFGLERKILAEAEKDNPNWSKFGIENLPTKASDTSSSKVTSSDPIVSKYIAMGLSREAVPIAVTNYGDNPTKVKEFVDGYTLLREMGFSSTSVTEALVMHDNDTDKALAHFLSGSS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03772 211 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 167 209 IPR015940 -
Trre5g03772 211 MobiDBLite consensus disorder prediction 33 52 - -
Trre5g03772 211 Gene3D UBAP1 SOUBA domain 124 211 IPR042575 -
Trre5g03772 211 FunFam Ubiquitin-associated/translation elongation factor EF1B protein 133 210 - -
Trre5g03772 211 MobiDBLite consensus disorder prediction 1 62 - -
Trre5g03772 211 PANTHER LD44032P 32 209 IPR038870 GO:0000813|GO:0043130|GO:0043162
Trre5g03772 211 SUPERFAMILY UBA-like 174 209 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03772 Trre-Chr5 37806076 37809573 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03772 - - tpra:123909312 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03772 5 37806076 37809573 Trre5g03772 5 37806076 37809573 ECH