Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03770 ATGCATAGTAAAGGATCGAGCCACAAACTTTCCACTATGGCTAATCGATCCCGAATTCCTTCACTATTCATCTCCATGTTCGCCACTTTCGCTACTATCTACGTCGCTGGAAGATTATGGCAAGACGCTGAGAATCGTGTTTATCTCATCAGAGAGCTTGATAGAATCACTGGTCAGGGACAATCTGCTATATCGGTGGATGATACGTTGAAGATCATAGCTTGCAGGGAACAACATAAGAAGCTTGATGCGCTTGAGATGGAACTTGCTGCAGCTAAACAAGAGGGTTTTGTTTCTAAGGGCTTGATTGAGACCAACGGGACTTACTCTAAGAGAAGACCCTTGGTAGTCATAGGTATACTGACAAAGTTTGGCCGCCAGAAGAATAGAGATGCCATTCGTAAAGCTTGGATGGGAAGTGGTGCAGCTTTGAAGAAAATAGAAGATGGAAAGGGCATCATTGTGCGATTTGTTATCGGTAGAAGTCCAAATCGTGGAGACAGTCAGGATAAAGACATTGATCGTGAGAATAGGTTGACAAATGACTTCCTAATTCTAGATGATCATGTAGAAGAAAATGAGGGACACCCAGAGAAGGCAAAATTGTTTTTCGCTCACGCTGCAGACGAATGGGATGCGGAGTTTTATGCTAAAGTCAATGATGATGTTTATGTAAATATTGATGCCTTGGGAGCTACACTTGCAACTCATTTGGACAAACCCCGCCTTTACATAGGATGCATGAAATCAGGCGAAGTTTTCTCTGAAAAGAACCATAAATGGTACGAACCAGAATGGTGGAAGTTTGGTGACAAAAAATCATATTTTCGTCATGCATCAGGAGAGACGTATGTAATATCACGAGCTTTGGCTAAATTCATATCAATAAACAGATCTATTCTTCGTACCTATGCCCATGATGATGTTAGTGCTGGATCCTGGTTTATTGGACTTGATGTGAAGCATGTTGACGAAGCAAAGTTTTGTTGCTCGTCTTGGTCAACAGGAGCAATTTGTGCTGGTGTTTGA 1029 0.4198 MHSKGSSHKLSTMANRSRIPSLFISMFATFATIYVAGRLWQDAENRVYLIRELDRITGQGQSAISVDDTLKIIACREQHKKLDALEMELAAAKQEGFVSKGLIETNGTYSKRRPLVVIGILTKFGRQKNRDAIRKAWMGSGAALKKIEDGKGIIVRFVIGRSPNRGDSQDKDIDRENRLTNDFLILDDHVEENEGHPEKAKLFFAHAADEWDAEFYAKVNDDVYVNIDALGATLATHLDKPRLYIGCMKSGEVFSEKNHKWYEPEWWKFGDKKSYFRHASGETYVISRALAKFISINRSILRTYAHDDVSAGSWFIGLDVKHVDEAKFCCSSWSTGAICAGV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03770 342 Coils Coil 75 95 - -
Trre5g03770 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 82 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Trre5g03770 342 FunFam Hexosyltransferase 105 334 - -
Trre5g03770 342 Pfam Domain of unknown function (DUF4094) 18 94 IPR025298 -
Trre5g03770 342 Pfam Galactosyltransferase 129 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Trre5g03770 342 Gene3D - 110 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03770 Trre-Chr5 37780583 37784827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03770 21 342 Glycosyltransferase AT5G53340 72.050 1.36e-178 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03770 K20854 - gmx:100779561 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03770 5 37780583 37784827 Trre5g03770 5 37780583 37784827 ECH