Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03748 ATGTGGCCTCACAACGTAGGTGTGGAGTCTACAGGAACTGTTAGCTGGACAGTCTTCAGCGCAAGTATATTTGTGCTTGTTGCCCTTGTTCTTTCCATGTACCTAATATTCGAGCATTTAGCTGCCTATAATCAGCCCGAGGAGCAGAAGTTTTTGATTGGACTCATTTTAATGGTTCCTGTCTATGCATTGGAATCGTTTTTGTCACTATTGGATTCCAGTGCTGCATTTAACTGTGAAATTATCCGGGACTGCTATGAGGCTTTTGCGCTATATTGCTTTGAGAGATACCTGATAGCTTGCTTAGGTGGTGAGGATAAAACAATTCAATTTATGGAAAGTACGAGCGTAACAGACTCCAGCACTCCTCTTCTGAAAGATGCCTATGCATATGGAGTTGTAGAACATCCATTTCCTTTAAATTGCTTCTTAAGAGATTGGTATCTTGGCCCTGACTTCTATCAATCTGTGAAAATTGGCATCGTACAATATATGATACTGAAAATGATCTGTGCATTGCTGGCAATGATCCTCGAGTCTTTTGGGGTTTATGGAGAGGGGAAGTTTGAATGGAGATATGGGTATCCCTACTTGGCCAGTATTCTTAATTTTAGTCAGACATGGGCCCTGTATTGCCTTGTACAATTCTATTCTGTCATTAAAGATAAACTGGAGCCAATCAAACCATTAGCCAAATTTTTAACATTTAAATCAATAGTTTTTCTAACATGGTGGCAAGGAGTGGCCGTCGCATTTCTTTTTTCTATGGGAGCATTTAAAGGGTCACTGGCTCAAGAGCTGAAAACACGTATACAAGACTATATCATCTGCATAGAGATGGGCGTTGCTGCTGTTGTGCACCTCTATGTCTTCCCAGCAGTACCTTACAAAAGAGGGGAGAGGTGTGTTCGCAATGCATCAGTGATGGCTGACTATGCATCACTAGGGACACCTCCTGATCCATCAGAGGTTCGTGACTGTGAGCGCTCAACTAGAATGCGGCTGGGCCGCAATGGTGAGAAAGATAAGAAGCCTATGAAGTTTCCACATAATGTTCGTGATGTGGTTCTTGGAAGTGGTGAAATTATTGTTGATGACATGAAATTTACAGTTTCACACGTGGTAGAACCTGTTGAAAGGGGCATTTCAAAGATAAACAAAACCTTCCATCAGATATCAGAAAATGTAAAACGCCATGATGAAGAGCGGAAGAAAAACACCAAGGATGATAGCCACCTCGTTCCCCTGCATTCATGGAGAACAGAATTTTCTGATGTTCACGACAAACTTGTGGAAGGAAGTGTCAGTGATAGTGGGGTGTCCAGCGGAAAGAGACATACTCAATCCAAGGCGTCAGCCTCCAGGATGAGAAGATAG 1377 0.4241 MWPHNVGVESTGTVSWTVFSASIFVLVALVLSMYLIFEHLAAYNQPEEQKFLIGLILMVPVYALESFLSLLDSSAAFNCEIIRDCYEAFALYCFERYLIACLGGEDKTIQFMESTSVTDSSTPLLKDAYAYGVVEHPFPLNCFLRDWYLGPDFYQSVKIGIVQYMILKMICALLAMILESFGVYGEGKFEWRYGYPYLASILNFSQTWALYCLVQFYSVIKDKLEPIKPLAKFLTFKSIVFLTWWQGVAVAFLFSMGAFKGSLAQELKTRIQDYIICIEMGVAAVVHLYVFPAVPYKRGERCVRNASVMADYASLGTPPDPSEVRDCERSTRMRLGRNGEKDKKPMKFPHNVRDVVLGSGEIIVDDMKFTVSHVVEPVERGISKINKTFHQISENVKRHDEERKKNTKDDSHLVPLHSWRTEFSDVHDKLVEGSVSDSGVSSGKRHTQSKASASRMRR 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03748 458 Coils Coil 456 458 - -
Trre5g03748 458 SMART Solute_trans_a_2 17 296 IPR005178 -
Trre5g03748 458 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 13 412 IPR005178 -
Trre5g03748 458 MobiDBLite consensus disorder prediction 433 458 - -
Trre5g03748 458 MobiDBLite consensus disorder prediction 435 449 - -
Trre5g03748 458 Pfam Organic solute transporter Ostalpha 19 296 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03748 Trre-Chr5 37579897 37583161 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03748 - - gmx:100804401 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03748 5 37579897 37583161 Trre5g03748 5 37579897 37583161 ECH