Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03701 ATGGCTCTTGAGAATTGTTTAAGAGTATCCACACCAAGACCTCATTGTCTTCCTCCATTGTTTTCAACTTCAAGGGAAAAGCTTGTTTTCTCAGCTCAAAAAGTAGGATTCAAGAAATCTGAGCTCAACTCAACACTATCACTTCCATCTGGTGTTGCCTACAGAAAATCACGTTTTATTTGCAATGCTCGTGAAGCTGTAAATGAAGCTCAGGCAGTGGTTGACTCAAGCTGGGATGAGCTTGTCCTTGCAAGTAAAATCCCTGTGCTGGTAGATTTTTGGGCACCATGGTGTGGTCCATGCAGGATTATAGCACCTATTGTTGATGAGTTAGCCAGAGAATATGCTGGAAAAATTGCATGCTACAAGCTCAACACAGATGAATCTCCAAACACAGCAACAAGGTATGGCATCAGAAGCATTCCAACTGTTATATTCTTCAAGAATGGAGAGAAACTAGAAACTGTGATTGGTGCAGTTGACAAGTCTGCTCTGATCTCAAAAGTGGAAAAATATATTGTATGA 525 0.4076 MALENCLRVSTPRPHCLPPLFSTSREKLVFSAQKVGFKKSELNSTLSLPSGVAYRKSRFICNAREAVNEAQAVVDSSWDELVLASKIPVLVDFWAPWCGPCRIIAPIVDELAREYAGKIACYKLNTDESPNTATRYGIRSIPTVIFFKNGEKLETVIGAVDKSALISKVEKYIV 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03701 174 Pfam Thioredoxin 72 170 IPR013766 -
Trre5g03701 174 FunFam Thioredoxin 64 173 - -
Trre5g03701 174 NCBIfam thioredoxin 75 172 IPR005746 GO:0015035
Trre5g03701 174 Gene3D Glutaredoxin 71 173 - -
Trre5g03701 174 SUPERFAMILY Thioredoxin-like 58 172 IPR036249 -
Trre5g03701 174 CDD TRX_family 76 170 - -
Trre5g03701 174 PRINTS Thioredoxin family signature 97 106 - -
Trre5g03701 174 PRINTS Thioredoxin family signature 89 97 - -
Trre5g03701 174 PRINTS Thioredoxin family signature 137 148 - -
Trre5g03701 174 ProSiteProfiles Thioredoxin domain profile. 60 174 IPR013766 -
Trre5g03701 174 PANTHER GEO12009P1 73 173 - -
Trre5g03701 174 ProSitePatterns Thioredoxin family active site. 90 108 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03701 Trre-Chr5 36652061 36653051 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03701 K03671 - gmx:100500292 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03701 5 36652061 36653051 Trre5g03701 5 36652061 36653051 ECH