Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03694 ATGTCTGAGGGAAGAGGCAGTGCATCAGTGAACATGGTCATTGTGATTTCACTGCTATGCATTTTAGTTATAGCTGAAAATACTAATGCAGAAACTCACAAAGTTGGAGGACCTAAGGGATGGACCTTCGGCATGGTGAGTTGGCCCAATGGTAAAACGTTTAAAGCTGGCGATGTGCTTGTATTCGACTACAATGCAAAGTTACACAATTTGGTTGCGGTGGACGAAATTGGATACAAACGCTGCAAGACGCCGGCAGGTGCTCAAGTGTTACGTACAGGGCATGAAGAAATCGAGTTAGCTAGCGGGGCAAACTACTTCATATGCAATGTTCCCGGTCACTGCCAAACTGGGATGAAAATTTCCATCAATGTAGCTTAG 381 0.4488 MSEGRGSASVNMVIVISLLCILVIAENTNAETHKVGGPKGWTFGMVSWPNGKTFKAGDVLVFDYNAKLHNLVAVDEIGYKRCKTPAGAQVLRTGHEEIELASGANYFICNVPGHCQTGMKISINVA 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03694 126 PANTHER BLUE COPPER PROTEIN 25 125 IPR039391 GO:0009055
Trre5g03694 126 ProSiteProfiles Phytocyanin domain profile. 31 126 IPR003245 GO:0009055
Trre5g03694 126 Gene3D - 29 126 IPR008972 -
Trre5g03694 126 SUPERFAMILY Cupredoxins 32 125 IPR008972 -
Trre5g03694 126 FunFam basic blue protein-like 31 125 - -
Trre5g03694 126 CDD Plantacyanin 32 125 IPR041844 -
Trre5g03694 126 ProSitePatterns Type-1 copper (blue) proteins signature. 103 119 IPR028871 -
Trre5g03694 126 Pfam Plastocyanin-like domain 42 119 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03694 Trre-Chr5 36455096 36456504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03694 8 125 Miscellaneous Gene Families AT2G32300 40.496 8.53e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03694 - - lja:Lj0g3v0108379.1 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03694 5 36455096 36456504 Trre5g03694 5 36455096 36456504 ECH