Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03677 ATGGAAACTGAAATGCCTGTTGTGATTGTCGGTGCAGGGCCTGCTGGCTTAGCAACCTCAGCATGTCTTAACAAATTTTCAATACCAAACATTGTCTTAGAAAAAGATGATTGTCATGCATCACTTTGGAGAAAAAGAGCTTATGATCGTTTAAAACTTCATTTGGCTAAAGAATTTTGTAACCTACCTCACATGCCTTTCTCATCTGATTTACCTAAATTTGTCCCTAGGGTTGATTTTCTTCGTTATTTGGACGAATATGTGATTAATTTTAAGATCTCTATTCGGTATAATCGGTATGTTAATGATGCATCTTTTGATGTTAAGAATGGGAAATGGAGTGTTAGTGTGAAAAATAATATATTGGGTGTGGATGAGATTTATGTTGCTGATCATCTTGTGGTTGCAACTGGAGAAAATTGTGATGCTTATGTTCCCATGATAAATGGGCTTGAAAACTTTGAAGGTGAATACCTTCATTGTAACAAATATTTGAATGGAAGATCATGGTATGATAAGAATGTGTTGGTGGTTGGAAGTGGTAATTCTGGCATGGAGATTGCTTATGATCTCACAACATGGGGTGCAAATACATCCATAGTGATAAGAAGTCCAGTACATTATTTTACAAAAGAAATGGTGTATGTTGGAATGACTTTGCTGAACTACTTAAGTATTGATAAGGTGGACAAGCTAATGCTGGTTATGAGCAAACTGATGTATGGAGATCTGTCCAAGTATGGCTTGGTCAGACCAAAGGAAGGACCTTTTGCTATGAAATTCAGTGGCGGTCGTACGCCTACCGTTGATGTTGGATGCATCAAAAGGATTAAGAAAGGCAAAGTGAAGGTATACCCTGCTACCATTGCAAGCATAAAAAAGGGAAAGATTGTTGAATTTGAGGATGGAAAAAGTGGTGAATTTGATGTCATAGTCTTTGCTACTGGATACAGAACCAATGTGCAAAAGTGGCTTAAGGATTACAAAGAGTTGTTCAATGAGAATGGACTGCCAAAACGATGTTATCCAAATCACTGGAAAGGAGGAAATAGAATTTATTGTGCTGGATTCTCAAAAAATGGATTACAAGGAATTGCTTATGATGCTCAGGAAATAGCAAATGATATCAATTTCACCATTAATGCAAACAAGCTACCTGCAGCTGTTGAGGCCAATGCTCAAATCAAGTTTTGGATTAATAAGTTTTTCAGTAAAATCAAGTTTTAG 1227 0.3667 METEMPVVIVGAGPAGLATSACLNKFSIPNIVLEKDDCHASLWRKRAYDRLKLHLAKEFCNLPHMPFSSDLPKFVPRVDFLRYLDEYVINFKISIRYNRYVNDASFDVKNGKWSVSVKNNILGVDEIYVADHLVVATGENCDAYVPMINGLENFEGEYLHCNKYLNGRSWYDKNVLVVGSGNSGMEIAYDLTTWGANTSIVIRSPVHYFTKEMVYVGMTLLNYLSIDKVDKLMLVMSKLMYGDLSKYGLVRPKEGPFAMKFSGGRTPTVDVGCIKRIKKGKVKVYPATIASIKKGKIVEFEDGKSGEFDVIVFATGYRTNVQKWLKDYKELFNENGLPKRCYPNHWKGGNRIYCAGFSKNGLQGIAYDAQEIANDINFTINANKLPAAVEANAQIKFWINKFFSKIKF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03677 408 Gene3D - 1 385 IPR036188 -
Trre5g03677 408 Pfam Flavin-binding monooxygenase-like 7 320 IPR020946 GO:0004499|GO:0050660|GO:0050661
Trre5g03677 408 PRINTS Pyridine nucleotide disulphide reductase class-II signature 6 28 - -
Trre5g03677 408 PRINTS Pyridine nucleotide disulphide reductase class-II signature 170 194 - -
Trre5g03677 408 SUPERFAMILY FAD/NAD(P)-binding domain 1 279 IPR036188 -
Trre5g03677 408 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
Trre5g03677 408 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
Trre5g03677 408 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 6 383 - -
Trre5g03677 408 SUPERFAMILY Nucleotide-binding domain 273 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03677 Trre-Chr5 36024979 36027899 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03677 K11816 - gmx:100818396 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03677 5 36024979 36027899 Trre5g03677 5 36024979 36027899 ECH