Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03639 ATGTTAAAGCCATCTTTCAGATGTTACTCCTCCATCACTACTACTAATTCTACACCTTCCTACAATTCCCTTGTTTCTGAGACTGTGAGGCTCTTGGGTCCTCCAACAAAATTTGAAGCTTCAAAACTGAAGGTTGTTCTATTGGAAGAGCAGATAAATAGATATGCAAGTATTATTCCGAGAACCTACATTCTATCCCACTGCGACTTAACGGCAAATCTGACTTTAGCTGTTTCCAATGTGATCAAACTAGAGCAGTTGAGAGGGTGGTACGAGAAAGACGATGTTGTAGCTGAATGGAAGAAAGTGAAAAATGAAATGTGCCTACATGTTCATTGCTTTGTCAGTGGTCCTAATCCCTTCCTAGATCTGGCTGCTGAATTTAGATATCACATATTCTCCAAGGAAATGCCTTTGGTACTCAAAGCAATTCAATGTGGAGATTCTGTACTTTTCCGTGATAATCCAGAATTGCTGGATTCTACAGTTCGAGTATATTTTCATTCTAGCTCAAAAAAATACAACAGAATGGAATGTTGGGGGCCTTTAAAGGATGCGATGGAGGGAAAACGCGCGGATCAGTTACAAGGGTTGATAAACAGAGATCGTCCTCCGGAAAAGTGGAGAAGTCCAATGTCCATCTTCCAAGCTCTTTTTGCTTTTCTTCTTTGA 672 0.4033 MLKPSFRCYSSITTTNSTPSYNSLVSETVRLLGPPTKFEASKLKVVLLEEQINRYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGWYEKDDVVAEWKKVKNEMCLHVHCFVSGPNPFLDLAAEFRYHIFSKEMPLVLKAIQCGDSVLFRDNPELLDSTVRVYFHSSSKKYNRMECWGPLKDAMEGKRADQLQGLINRDRPPEKWRSPMSIFQALFAFLL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03639 223 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 15 223 - -
Trre5g03639 223 Pfam Staygreen protein 37 186 IPR024438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03639 Trre-Chr5 35127381 35130183 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03639 K22013 - gmx:100792871 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03639 5 35127381 35130183 Trre5g03639 5 35127381 35130183 ECH