Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03597 ATGGCTTCTTCTTCCCTCGGCGACAATTTCAACCTTCTCTCACCTCAGCAGCAAGAGTTGGTGAAGATGCTATTGAATAATGGCCAAGACCATCTGTTTAACAATTGGCCTGCTCCCGGTGTTGACGACGACGAGAAGAAAGCGTTCTTCGATCAGCTTGTTCTTCTTGATTCTAGTTACCCTGGTGGTTTGGTTGCATATATCAATAATGCTAAACGACTCTTGGCTGATTCCAAAGCTGGTACTAACCCTTTTGATGGCTTCACTCCTTCCGTTCCAACTGGGGAGACATTGGCATTTGGTGATGAGAACTTTATCAAATTTGAGGAAGCAGGTGTGCGTGAAGCGAAAAGAGCTGCATTTGTTCTTGTTGCTGGTGGTCTTGGGGAGCGCCTAGGATACAATGGGATTAAGGTTGCTCTTCCAGCAGAAACAACTACGGGAACATGTTTCTTACAACATTACATCGAATCCATATTAGCACTTCAAGAAGCAAGCTCAGAAGGCGAAAGCAAGGCACAAATTCCATTTGTTATTATGACATCTGATGACACCCACGGGCGTACCTTAGAACTATTAGAATCAAATTCTTACTTTGGGATGCAACCCACACAAGTAACACTCTTAAAGCAGGAAAAAGTTGCGTGCTTAGAAGATAATGATGCCAGGCTTGCATTGGATCCACAAAACAGATACAGAATTCAGACAAAACCTCACGGGCATGGTGATGTGCATTCACTTCTTCATTCCAGCGGTATTCTGAAAGTATGGCATGATGCTGGGTTGAAATGGGTTCTCTTTTTCCAAGATACAAATGGACTTCTGTTCAAGGCAATTCCATCAGCACTGGGTGTCAGTTCTACCAAACAGTACCAGGTCAATTCCCTTGCAGTACCTCGGAAAGCAAAAGAAGCTATTGGTGGAATTACTAGGCTCACCCATTCTGATGGGAGGTCTATGGTGATAAATGTGGAGTACAATCAGCTAGATCCACTTTTGAGAGCAAGTGGATACCCTGATGGTGATGTCAACAGTGAGACTGGCTTCTCCCCATTTCCAGGAAATATAAACCAATTGATTTTAGAACTTGGTCCTTACATTGAAGAGCTCGCAAAAACAGGAGGTGCCATACAGGAGTTTGTTAACCCAAAGTACAAAGATGCCAGCAAAACTGCATTTAAATCTTCAACTAGACTTGAATGTATGATGCAAGACTATCCAAAAACGTTGTCCCCGTCTGCCAGGGTTGGGTTCACGGTGATGGAAACTTGGTTTGCTTATGCACCTGTGAAGAATAATGCTGAGGATGCTGCTAAGGTGCCAAAAGGAAATCCATACCATAGTGCTACCTCTGGAGAAATGGCCATCTATCGTGCAAATAGCATTATTCTCAAAAAGGCTGGTTTTCAAGTAGCAGATCCAGTATTGCAGGTTTTCAATGGTCAAGAGGTTGAAGTTTGGCCCCGTATCACATGGAAGCCAAAATGGGGTCTGACTTTTTCTTCAATCAAGAGCAAAGTCAGTGGAAATTGCTCCATTTCTCAGAGGTCTACGCTCGCAATCAAGGGTCAAAAAGTTTTCATCGAAAATCTTTCCTTAGATGGGGCTCTTATCATAGAATCTGTCAATGATGCAGAGGTAAAGGTGAGTGGTTCAGTTCAGAACAATGGTTGGACTATTGAACCAATTGACTACAAAGATTCCTCAGAACCTGAAGTATTGAGAATCAGGGGTTTTAAATTTAACAAAGTTGAACAAGTGGAAGAGAAATACTCTGCGCCAGGCAAATTTCAATTCAAGGCTTGA 1806 0.4286 MASSSLGDNFNLLSPQQQELVKMLLNNGQDHLFNNWPAPGVDDDEKKAFFDQLVLLDSSYPGGLVAYINNAKRLLADSKAGTNPFDGFTPSVPTGETLAFGDENFIKFEEAGVREAKRAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLQHYIESILALQEASSEGESKAQIPFVIMTSDDTHGRTLELLESNSYFGMQPTQVTLLKQEKVACLEDNDARLALDPQNRYRIQTKPHGHGDVHSLLHSSGILKVWHDAGLKWVLFFQDTNGLLFKAIPSALGVSSTKQYQVNSLAVPRKAKEAIGGITRLTHSDGRSMVINVEYNQLDPLLRASGYPDGDVNSETGFSPFPGNINQLILELGPYIEELAKTGGAIQEFVNPKYKDASKTAFKSSTRLECMMQDYPKTLSPSARVGFTVMETWFAYAPVKNNAEDAAKVPKGNPYHSATSGEMAIYRANSIILKKAGFQVADPVLQVFNGQEVEVWPRITWKPKWGLTFSSIKSKVSGNCSISQRSTLAIKGQKVFIENLSLDGALIIESVNDAEVKVSGSVQNNGWTIEPIDYKDSSEPEVLRIRGFKFNKVEQVEEKYSAPGKFQFKA 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03597 601 FunFam UDP-sugar pyrophosphorylase 469 589 - -
Trre5g03597 601 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 12 576 IPR039741 -
Trre5g03597 601 CDD UGGPase 119 433 - -
Trre5g03597 601 Pfam UTP--glucose-1-phosphate uridylyltransferase 113 266 IPR002618 GO:0070569
Trre5g03597 601 Gene3D - 469 589 - -
Trre5g03597 601 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 14 468 IPR029044 -
Trre5g03597 601 FunFam UDP-sugar pyrophosphorylase 14 468 - -
Trre5g03597 601 SUPERFAMILY Nucleotide-diphospho-sugar transferases 18 543 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03597 Trre-Chr5 34480029 34492955 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03597 K12447 - ag:BAD66876 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03597 5 34480029 34492955 Trre5g03597 5 34480029 34492955 ECH