Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03596 ATGGCCACAAGTTGTTCCTACATGGTTTCTACCAAATTATCCCTACAAGGTTGGACAGGAGGAAGAAGAAAAGAAGTGAGAAACAGAAAACCAATTTTCATATCAGCTCAACAACAATCTGATGTTAAAGAAGCAGATAATGTGAAGGCAGAAGAAGAGAAAGAAAGACCACAAAATCAACAAATGAATCCAAAAGGAACAAAACCAAGACCAGTTGAACCTCAAGTGCTTGTAAAAGACAAAGGAATGAGCAGAGATTATGGAGGACAGTGGTTGAGCTGTGCCACAAGACATGTTAGGATCTATGCAGCTTATATTGATCCAGAAACAAGTACTTTTGATCAATCACAAATGGATAAACTCACTCTTATTCTTGATCCTACTAATGAGTTTGTGTGGAATCCTGATACTTGTAATTTGGTTTATTCTTACTTTCAGGAGCTTGTGGATCATTATGAGGGTGCTCCATTGAATGAATACACACTTCGGTTGATTGGTTCAGATATAGAGCATTATATAAGAAAGTTGTTATATGATGGAGTAATCAAGTATAATATGAATGCAAGAGTTCTGAATTTCAGCATGGGAAAGCCACGGATCATGTTCAATAACAATGATATCCAACCTGAAGATGCTGCTACTTCCACTTGA 651 0.3702 MATSCSYMVSTKLSLQGWTGGRRKEVRNRKPIFISAQQQSDVKEADNVKAEEEKERPQNQQMNPKGTKPRPVEPQVLVKDKGMSRDYGGQWLSCATRHVRIYAAYIDPETSTFDQSQMDKLTLILDPTNEFVWNPDTCNLVYSYFQELVDHYEGAPLNEYTLRLIGSDIEHYIRKLLYDGVIKYNMNARVLNFSMGKPRIMFNNNDIQPEDAATST 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03596 216 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC 1 212 IPR018922 GO:0016655
Trre5g03596 216 MobiDBLite consensus disorder prediction 44 59 - -
Trre5g03596 216 MobiDBLite consensus disorder prediction 26 74 - -
Trre5g03596 216 Coils Coil 35 55 - -
Trre5g03596 216 Pfam Cyanobacterial and plastid NDH-1 subunit M 92 200 IPR018922 GO:0016655
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03596 Trre-Chr5 34474374 34475672 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03596 - - gmx:100527195 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03596 5 34474374 34475672 Trre5g03596 5 34474374 34475672 ECH