Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03551 ATGGACGAATTTGGTGTATTGACGGAAAGATTCGGATTGAAACCTCAAGGTAAATCGGCTCCAATGGCTTCCACTAAACGATCATCCACACCAAAAACTGTCGGTTCTCCCCAAAACGGATCCAGATCTCCCCAACATTCAACTTTCGATTTCGATTACGGTGTTTTCGCCACCGCCAATAACAAAACGCAGACTTCAGGGGATTTTTCCGATGGCATTGACGAGATCTTCGGTGCTGGAATTCCTAAATCCATTGTATCCGATCCGATTTTCGGTGGTGGCTTCAATCAATCGGTTTCAACGTCGAAGTCGTCGCATGTTTATGTAGATGATATATTCGGTGGTGTCAATGAAAAAAGTGTCGGTGACGGTATTGATGATTTACTTGGTAAGATTGGTGGATTGCATGCAACAAACGGTAAAAGTTCGATGCAAAAGTCGCCTGATTTTGATGACTTAATGGCTGGGTTTGGTGGTACCAGCAGCTTTTCAAATAATGGGAAAGCAAGCATTGAGACGAATAATGCCCACAAATCAACCGTGACATCTCACAATGATCCATTTTTAGTATTTGAAACATCTTCAAACACAGCATCTTCAGAATCATTCTTGGACTCATTAGAGCAAATGAGTAAGAATAGTTCTAAACGTACAAGTGGCAGCTCCAGTCCCTCCCCATTATTGAGACCTCCCCCGAAGTCAGGGAGTGCTTCAAACTCAATCAACAACTCACGTATGTCATCAATAGATGAGCTTGAGAACTTTGCCATGGGCCGGGTGCAGAGTAATGCCACTAGAAAGGCAAATACCAACACTGGTGAGATTAAGCAAAACTCAGTGGCTAAGACAAACAAAGATAAAGGAGCTCCGGCTACAAGAGTGAATCAATTAAATGGTGCGGATGATCTTGAATCCTTTTTCAGCACGGGCTTTCGATCAAACAGTGTACCAAAGTCAAGGGCTGCAACTATGGATCATATGTTTGATCGCCAAGTAAACAATAATGGAAAACCTGAAGGTTCACAAAGAGTGCCGTCGGGATCCCAAGCCAATGTGAAAAAATCTTCACCCACGACATCTTTTAATGATTTGTCATTGATTTTTGGCGCTTCCTCATCACCTGAATTCGAGGAAGTGGAAGGTGAAACTGAAGAAAGAAGAAAAGCGAGATTAGGACGCCATCAGAGAACACAAGAGAGAGCGTTGAAAGCAGTGGCTGATATGAACCAGCGTGATCTCCAATCTAAGATGGAACAAGAAGAGAGACGTCGAATAGCCGACACTGTTGATGTTCAGATAAAGAGGTGGGCTACAGGGAAAGAAGGCAATATGCGGGCATTGCTGTCATCATTGCAAAATGTTCTTTCGCCAGATTATGGGTGGCAGCCAGTGTCTCTGACGGATATGATCACTTCAGCTTCCGTGAAAAAAGTGTATAGAAAAGCGACATTATGTATTCACCCAGATAAAGTCCAGCAGAAAGGTGCTAATCTTGAACAGAAATATACCGCAGAGAAGGTTTTTGACATCCTTAAGGAAGCTTGGACCAAGTTCAATGCAGAAGAGCTTTCCTGA 1575 0.4317 MDEFGVLTERFGLKPQGKSAPMASTKRSSTPKTVGSPQNGSRSPQHSTFDFDYGVFATANNKTQTSGDFSDGIDEIFGAGIPKSIVSDPIFGGGFNQSVSTSKSSHVYVDDIFGGVNEKSVGDGIDDLLGKIGGLHATNGKSSMQKSPDFDDLMAGFGGTSSFSNNGKASIETNNAHKSTVTSHNDPFLVFETSSNTASSESFLDSLEQMSKNSSKRTSGSSSPSPLLRPPPKSGSASNSINNSRMSSIDELENFAMGRVQSNATRKANTNTGEIKQNSVAKTNKDKGAPATRVNQLNGADDLESFFSTGFRSNSVPKSRAATMDHMFDRQVNNNGKPEGSQRVPSGSQANVKKSSPTTSFNDLSLIFGASSSPEFEEVEGETEERRKARLGRHQRTQERALKAVADMNQRDLQSKMEQEERRRIADTVDVQIKRWATGKEGNMRALLSSLQNVLSPDYGWQPVSLTDMITSASVKKVYRKATLCIHPDKVQQKGANLEQKYTAEKVFDILKEAWTKFNAEELS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03551 524 MobiDBLite consensus disorder prediction 207 224 - -
Trre5g03551 524 MobiDBLite consensus disorder prediction 232 250 - -
Trre5g03551 524 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 298 522 - -
Trre5g03551 524 SUPERFAMILY Chaperone J-domain 370 521 IPR036869 -
Trre5g03551 524 MobiDBLite consensus disorder prediction 330 369 - -
Trre5g03551 524 MobiDBLite consensus disorder prediction 380 398 - -
Trre5g03551 524 MobiDBLite consensus disorder prediction 1 48 - -
Trre5g03551 524 MobiDBLite consensus disorder prediction 207 297 - -
Trre5g03551 524 FunFam Auxilin-related protein 1 394 523 - -
Trre5g03551 524 MobiDBLite consensus disorder prediction 330 398 - -
Trre5g03551 524 Gene3D DnaJ domain 395 523 IPR036869 -
Trre5g03551 524 MobiDBLite consensus disorder prediction 21 48 - -
Trre5g03551 524 MobiDBLite consensus disorder prediction 258 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03551 Trre-Chr5 33292219 33297472 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03551 - - gsj:114415445 575.859