Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03547 ATGATTTCACAACACTTACGCATAGTATTGCTGTTGTTGCTGGCGTTTCCATTACTATGTGCTACTGAAGAAGATTCCGATTATTCTTCCTCCACCAGTGACAGCATCATCTTCACCACACTTGGCAGAGCTTTCTACGCTTTCGATATCTATTCTCTCCCAATTCACCACCCCCACCGTGAATTACAACTCACTGACGGCCACTCCGTCAATTTTAACGGCCACTTCATTTCCAATCACACATCCATTAAACTCCCCACAGACCTAAACCCACCTCCTCTTCAACTCGTTTACGTCACGGAGAGAAACGGTTATCCCACCATATACTACGACGCCGTTTACACAACATCAACACTTGAAGAAGAAGAAGAAGAAGAAGAAGATATCACAAACAGAATTCAACTTCCTCTCTTACCTAATCGTCTCACACAAACAGAGTCTCAAGTTTCGATCAAAGATAAACCAACGGTAACTACCGACGGTGAATATTTAGTCTACGTGTCAACACACGAGAATCCTGGTGTGCCACGTGTAAGCTGGACCGCCGTTTATTCCACTCACCTCATATCAGGTAACACCCGAAGGCTCACTCCTTACGGCGTCGCTGATTTCAGCCCCGCCGTCTCTCCCTCTGGAAAATGGACTGCAGTCGCTTCCTACGGTGGCCAAGGTTGGTCCGGTGAAGTAGAGGATCTCACTACAGACATCTATGTTTTCCTCACTAAAGACGGAACTCAACGATACAAGGTGGTTGAGCACGGTGGCTGGCCATCTTGGGTCGACGATCGGACAATTTACTTTCACCGGAGAGGCAACGACGGTTGGTGGAGTATTTACAGAGTGATTTTTACCGCTGATTCTTCTGACTTGGTTATCATCGAACGAGTCACACCACCGGGTCTACACGCGTTCACACCCGCAACCTCACCGGGAAACAACAAATTCATCGCCGTCGCGACTAGAAGACCTGATTCTAGTTTCCGTCACATCGAATTGTTTGATCTGGTTAACAACGAGTTCAAGGAACTGACTCGTTTCGTTTCGCCTAACGTTCACCATCTCAACCCGTTTATCTCATCCGATTCAACCCGGGTCGGGTACCATAAGTGTAGGGGAAAGGAAAGTAGTAATAGCAGTCCCCAGTTCTTGTTAGAGAATGTTCGGAGCCCCGTTCCAAATCTAACTCTCTTCCGGTTCACCGGTTCATTTCCGGTTTTCTCACCTTCCGGAGACCGAATCGCTTATGTTGAGATGCCCGGAGTTTATGTCATGAATCGGGACGGTTCAAACTGGCGTAAGGTTTCGGACTTGATGGCATTTTCGAGCGCATGGGACCGGGTTCGACCCGGTGTAATCTATACAGCAATTGGAGAAACATTTGCTTCGGAGAGCACACAGGTTGACATCGTATCAATCGATGTTGACCGGAACATAATCAAAAAGTTGACCCATGACGGAAAGAACAATGCATTTCCGTCACAATCACCTGATGGAAAATGGATTGTGTTCCGTTCAGGTCGAACGGGTCATAAGAATCTTTACATAATGGATTCTGTTGGTGGAGAGATAAGCGGACTTAGAAGGTTAACGGAGGGTCCATGGACAGATACAATGTGCAATTGGTCCCCTAATGGAGAATGGATAGCTTTTGCATCGGATCGTCATGATCCAGGTAGTGGAAGTTTCGAGATTTACCTAATCCACCCAAATGGAACCGGGTTGAGGAAACTAATTCAAAGTGGATCGGGTGGTAGAACAAACCACCCGTATTTTAGTCCTGATGGAAAAAGTATTGTGTTTACGTCAGACTATGCGGGTATATCAGCTGAACCAATTTCAAACCCGCATGCTTACCAACCTTACGGTGAAATATTCATCGTAAGATTGGATGGTTCGGGTTTAACAAGATTAACACATAATTCATATGAAGATGGAACTCCTGCTTGGTCGCCCAAATATATCAAGCCAGTAAATGTTGAGAGGCCTAAAGGTGGACCTTACTGTTCTTTTGATGATCTTCATTGGCTCAACAACATGCCAAATTACATTGTCAGTACAGGGCTGCATGCACAGTTTGGTTTGTAA 2085 0.4585 MISQHLRIVLLLLLAFPLLCATEEDSDYSSSTSDSIIFTTLGRAFYAFDIYSLPIHHPHRELQLTDGHSVNFNGHFISNHTSIKLPTDLNPPPLQLVYVTERNGYPTIYYDAVYTTSTLEEEEEEEEDITNRIQLPLLPNRLTQTESQVSIKDKPTVTTDGEYLVYVSTHENPGVPRVSWTAVYSTHLISGNTRRLTPYGVADFSPAVSPSGKWTAVASYGGQGWSGEVEDLTTDIYVFLTKDGTQRYKVVEHGGWPSWVDDRTIYFHRRGNDGWWSIYRVIFTADSSDLVIIERVTPPGLHAFTPATSPGNNKFIAVATRRPDSSFRHIELFDLVNNEFKELTRFVSPNVHHLNPFISSDSTRVGYHKCRGKESSNSSPQFLLENVRSPVPNLTLFRFTGSFPVFSPSGDRIAYVEMPGVYVMNRDGSNWRKVSDLMAFSSAWDRVRPGVIYTAIGETFASESTQVDIVSIDVDRNIIKKLTHDGKNNAFPSQSPDGKWIVFRSGRTGHKNLYIMDSVGGEISGLRRLTEGPWTDTMCNWSPNGEWIAFASDRHDPGSGSFEIYLIHPNGTGLRKLIQSGSGGRTNHPYFSPDGKSIVFTSDYAGISAEPISNPHAYQPYGEIFIVRLDGSGLTRLTHNSYEDGTPAWSPKYIKPVNVERPKGGPYCSFDDLHWLNNMPNYIVSTGLHAQFGL 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03547 694 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 14 657 - -
Trre5g03547 694 Pfam WD40-like Beta Propeller Repeat 480 515 IPR011659 -
Trre5g03547 694 Pfam WD40-like Beta Propeller Repeat 527 565 IPR011659 -
Trre5g03547 694 Pfam WD40-like Beta Propeller Repeat 586 603 IPR011659 -
Trre5g03547 694 Gene3D - 558 664 IPR011042 -
Trre5g03547 694 Gene3D - 451 557 IPR011042 -
Trre5g03547 694 SUPERFAMILY DPP6 N-terminal domain-like 156 446 - -
Trre5g03547 694 SUPERFAMILY Tricorn protease N-terminal domain 402 651 - -
Trre5g03547 694 Gene3D - 138 386 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03547 Trre-Chr5 33145041 33147125 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03547 - - mtr:25489690 1200.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03547 5 33145041 33147125 Trre5g03547 5 33145041 33147125 ECH