Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03476 ATGGGCTGCGGGGGCTCCAAAGTGGAGGAGTTCCCCGTGGTAACTCTCTGCAGACAGCGTAAACAGTTTCTCAAAAACGCCTCCGACCAACGCTATGCTTTCGCCGCCGCACACGTCGCTTATTTACAGTCTCTAAGAGATATCGGAGAAGCTCTTCGAAAATTCTCCGATCAAGATCTCTTCCTTCCAACTACTTCAACTCCTTCATCTTCAATTTCTTCCCCTGTTCTCACATTGCCTTCACACGAAGGTAAATCTAAAACTAGTAGTAACCGCCACATTTCATCTTCTTCACCTTCTCATCACGATGACGACGATGATGATTCTCATTTGCATCTTTCTTCTGGATCGGAGTTGAGTTCTCCTTCTTCAGATCATGTTCATCATCATCAGAGTGATCATCATCATCATCGAACACCCGAACCTGAATCCGAACCAGAACGAGAATTCCAATATCATCAACGCGAACCTGAACGAGAATTCGAATATCATCAACCTGAACCTGAACCTGAATCCGAACCATCTTCTTCTTACGGGTATAATTATCCATATCCACATTCTTATTCAGAAAATTGGAATCAAAATCAACCAGGGGTTAATAGTTATGCATATTACATGAAGAAATCTGCACCTCATGGAAAACCTATGATTTATCAAGAACCAGAGAGACACGTGGCAGCATCTGGACAATGGACTGGTTCACCTTACGGTTATGGTTATGGTTATCCTGATATGAATGGGAATGCTGGTGGTTTCTATGGTTTTCCGCCTGGGCCTTCGACTTCTTCTCCGCCGCCTCCTCCAGTTGCTCCGAATCCACCATCGCCGCCGCGAGTTTCTACTTGGGATTTCCTTAACTTTTTTGAGACTGTTGATAATGGTTATTCTGGTTATGGAAGTTTCGGATTAGGGTTAGGGTTAGCATCGAGTGGGAGTAGCCCCGATTCGAAAGAGGTTAGGGAGAGGGAAGGGATTCCTGAACTAGAAGATGAAACTGAACAGGAAACAACAGTGAAGGAGGTTCGTCACGAGAAGAAGAAAAAAGTGGCGGAGAAAGTGGAAAAGGAAAAAGAAAAGAAAATGGAAGAGGTTGGTGGTAGAGATTTTGGGGAAGGTACTTCGAATTCGAAGGAAGTGCCATTGCAACAAGTAAGTAGCAGCGAGGGAAGTTCCAAAACGGTGCGTTTTCACAGTAGTGACGATAGTGGTAGTTCGATTACTTCACATGAAAAAAAGAGTCATGATAGTGTTGTTTCTAAAGGATCTCCGCGAAAGAAAGGGGTGAGTTTTGAAATTGATGCTGATGAAGAAGCTGCTACTGTTACCACCGCGGAGATTGACGGTGAATCTTCTATTTTAAGTAGTTTAACCACTTTGTCCCCACATGGAACTAGAGATCTCAAAGATGTTGTTAGGGAAATTAGAGATGAGTTTGAGACTGCTTCGAATCATGGTAAAGAGGTTGCGTTTCTTCTTGAGGTTTACAAACCACCTTATCAGTCAAGGGTTGCTGCATTTAGAGCTATCTTTTCGAGGATATTGGAGATGCTAGCACCTTCCAATCCGCCTTCGGATCCTCCATCTGGGCCGCCGATCCAATTCTCTTCCAGGACAATGAAATTGGCAAAAGCATACTGCGGGGAACCTGAGAAAGAGTTAATATCAAATCCAATAAATCTTTCATCTACATTAGAGAAACTTTATGCTTGGGAAAAGAAGTTGTACAAGGAAGTTAAGGATGAAGAGAGGTTAAGAGCTATTTATGAGAAAGAATGTAAGAGACTGAAAGCATTGGATGATCGAGGAGCTGAAGCTACTAAAATTGATGCTGCTGAGGCATCAATTAGGAAGTTGCTAACAAAAATAAACATTTGTATCAGGAGTGTTGAAACTATATCAGGGAGGATACATAAATTAAGGGATGAAGAATTGCAGCCTCAGCTTGCAGCATTAATTAATGGATTGATAAGAATGTGGAAATTCATGCTCCAATGCCACCAGAAACAGTTCCAGGCTATCATGGAGAGTAAAACTCAATCTCTCAAGTTAAACAATGGTTTGCAAAGAGAAGAAGGTTTGAAAGTCATTATAGAACTCGAAAAGGAGCTTCTTAATTGGTGCACTCAGTTCAACAATTGGGTTAGGACTCAAAAATCTTATGTTGAAAATTTGAATGGTTGGCTTATAAGGTGCCTTCTTAATGAACCTGAAGAAACAGCCGACGGTGTTGTCCCTTTCTCTCCAGGTCGGATTGGGGCTCCACCTGCTTTCATAATCTGCAATGATTGGAATCAAGCAATGAATAGAATTTCAGAAAGAGGGGTGGCGGATGCTATGGGCGAATTTGCTCAAAAACTACATGAGTTATGGGAGAGACAAGATGAGGAACAAAGGCGGAAAATCACGGCAGAGTATCTCACAAAGGACTTCGAGAAACAACTTAGAGCTATGCACACCGAAATGGGAAGCTCAAAACACGAGCATGACAAAGTTTCAGGGAAGACTGCATTGTCGAAGTTTACTTCTGATAATGGTGTCTCACCGCTGGATGATCTAAAGGTTGATTTAGATTCTATGAAGAAGAGATTGCATGAAGAGAGGGCAAGACATAAAGAAGCCATTAAACTTGTACGCGATGCAGCTTCTAATAGTTTACAAACTGGTTTGATTCCCATTTTTAAGACACTAGAAAGTTTCACATCGGAGGTGGTGAAAGCGCACGAGCAAGTTAGACTTCAAAATGCTGGGGCCACGTAG 2757 0.4233 MGCGGSKVEEFPVVTLCRQRKQFLKNASDQRYAFAAAHVAYLQSLRDIGEALRKFSDQDLFLPTTSTPSSSISSPVLTLPSHEGKSKTSSNRHISSSSPSHHDDDDDDSHLHLSSGSELSSPSSDHVHHHQSDHHHHRTPEPESEPEREFQYHQREPEREFEYHQPEPEPESEPSSSYGYNYPYPHSYSENWNQNQPGVNSYAYYMKKSAPHGKPMIYQEPERHVAASGQWTGSPYGYGYGYPDMNGNAGGFYGFPPGPSTSSPPPPPVAPNPPSPPRVSTWDFLNFFETVDNGYSGYGSFGLGLGLASSGSSPDSKEVREREGIPELEDETEQETTVKEVRHEKKKKVAEKVEKEKEKKMEEVGGRDFGEGTSNSKEVPLQQVSSSEGSSKTVRFHSSDDSGSSITSHEKKSHDSVVSKGSPRKKGVSFEIDADEEAATVTTAEIDGESSILSSLTTLSPHGTRDLKDVVREIRDEFETASNHGKEVAFLLEVYKPPYQSRVAAFRAIFSRILEMLAPSNPPSDPPSGPPIQFSSRTMKLAKAYCGEPEKELISNPINLSSTLEKLYAWEKKLYKEVKDEERLRAIYEKECKRLKALDDRGAEATKIDAAEASIRKLLTKINICIRSVETISGRIHKLRDEELQPQLAALINGLIRMWKFMLQCHQKQFQAIMESKTQSLKLNNGLQREEGLKVIIELEKELLNWCTQFNNWVRTQKSYVENLNGWLIRCLLNEPEETADGVVPFSPGRIGAPPAFIICNDWNQAMNRISERGVADAMGEFAQKLHELWERQDEEQRRKITAEYLTKDFEKQLRAMHTEMGSSKHEHDKVSGKTALSKFTSDNGVSPLDDLKVDLDSMKKRLHEERARHKEAIKLVRDAASNSLQTGLIPIFKTLESFTSEVVKAHEQVRLQNAGAT 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03476 918 MobiDBLite consensus disorder prediction 97 113 - -
Trre5g03476 918 PANTHER UNCHARACTERIZED 1 912 - -
Trre5g03476 918 MobiDBLite consensus disorder prediction 253 276 - -
Trre5g03476 918 Coils Coil 571 598 - -
Trre5g03476 918 Coils Coil 338 363 - -
Trre5g03476 918 MobiDBLite consensus disorder prediction 404 431 - -
Trre5g03476 918 MobiDBLite consensus disorder prediction 375 403 - -
Trre5g03476 918 Pfam Protein of unknown function (DUF632) 467 787 IPR006867 -
Trre5g03476 918 MobiDBLite consensus disorder prediction 136 169 - -
Trre5g03476 918 MobiDBLite consensus disorder prediction 309 431 - -
Trre5g03476 918 MobiDBLite consensus disorder prediction 335 367 - -
Trre5g03476 918 MobiDBLite consensus disorder prediction 63 182 - -
Trre5g03476 918 MobiDBLite consensus disorder prediction 258 276 - -
Trre5g03476 918 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Trre5g03476 918 Coils Coil 849 876 - -
Trre5g03476 918 MobiDBLite consensus disorder prediction 63 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03476 Trre-Chr5 31938809 31946589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03476 465 800 Acyl Lipid Metabolism Gene Families AT2G27090 31.215 1.82e-44 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03476 - - aprc:113852495 1043.88