Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03453 ATGGGGAAGGAGATGGAAGAGGGTGGAAAGCGGAACACAGTTGAGCTATTTTTCTTATCAACTCTCATTCTGTGGCTTGTCTCCGTTTGTTTCCAGATACTTGTCAGTAACCGCACCGAACTTCTCTACATCATCGCCGGTTCCTTCTTCTACCAGACTTCTAACTCCCTTATCCGCTTCTTCTCCAAATCCACACCCACCACTGATCCTCTCTTCGTTAACACCTCCGTTTCCCTTATTCACTCCATTGTCACTTCCACTTCAGTGATCTTCATCTTGTCCAGACAGTGGTTAAGCAATGGGTTGAGCGGAATGTTTGACCACTTGCAGTTGGTTGAAGGTACATGGCCATGGGCATTTGAAGCATTGTGTTTTTCATGCGGTTACTTTGCATATGATCAGTGGGATATGCTTCATTACCGCTTATATAATGGTTGGATACCTTCTATCCTTGTGCATCATCTAGTTCTCCTCATTTGCTTCACGCTTGCTTTGTATCGAAATGTCACCATCAACTACCTTATTCTCACTCTTATCTGTGAGCTGCATTCCATCTTTCTGCATGTGAGAAAGGTGAGACGAATGGCCGGAATTCGCAATGCAAGGAACATTGTTGTTAAGTTAGAATGGTTTCTGAATTGGATCACCTTCTTTGTGGCAAGATGTGCATCTCATATTCTCATCACAGCCAAACTCATCAGGGATGCTCACAAATTTGGAAAGGGAGTGGAGCTACCACTGGCTCTTTTAGGCATGGCTGGGATGAATTTTCTGAACATTGGTCTTGGCATTGATCTTTTTAAAGCTTTTAAGAGAGAGAGCAAGCCTCATCAGACTAAGCAATGTCAACATCATGAATGA 861 0.4344 MGKEMEEGGKRNTVELFFLSTLILWLVSVCFQILVSNRTELLYIIAGSFFYQTSNSLIRFFSKSTPTTDPLFVNTSVSLIHSIVTSTSVIFILSRQWLSNGLSGMFDHLQLVEGTWPWAFEALCFSCGYFAYDQWDMLHYRLYNGWIPSILVHHLVLLICFTLALYRNVTINYLILTLICELHSIFLHVRKVRRMAGIRNARNIVVKLEWFLNWITFFVARCASHILITAKLIRDAHKFGKGVELPLALLGMAGMNFLNIGLGIDLFKAFKRESKPHQTKQCQHHE 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03453 286 PANTHER CT120 PROTEIN 24 280 - -
Trre5g03453 286 Pfam TLC domain 72 259 IPR006634 GO:0016020
Trre5g03453 286 ProSiteProfiles TLC domain profile. 67 278 IPR006634 GO:0016020
Trre5g03453 286 SMART lag1_27 67 272 IPR006634 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03453 Trre-Chr5 31343947 31346079 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03453 - - gmx:100806828 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03453 5 31343947 31346079 Trre5g03453 5 31343947 31346079 ECH