Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03447 ATGAACGCTTACATTATCGGTTTCGTTGTTCCACTCGTCATATTCCTCTTCAAAAATGCCAAATCTCGCAAACGCCGTGGTTTACCCGCCGACGTCGCCGGAGATCCCGGTTTCGCGGTCCGCAACCACCGCGTCACTTCTCCGATGACATCCGCTTGGGAAGGCGTAACGACTCTCGCGGAGCTTTTCGAGCGTGCATGCAGAGAGCATCACGAGAGATTGTTACTCGGAACGCGTGAATTGATCTCGAGAGAGATTGAAACTTCTTCCGATGGAAGAAGCTTCGAGAAGCTTCATCTTGGAGAGTATAAATGGATTACGTATGGAACGGTTTTTGAATCTGTTTCTAGTTTTGCTTCTGGTTTGGCTAAAATTGGTCATGTTAGAGAAGAACGTGCTGCTATTTTTGCTGAAACTAGAGAAGAATGGTTTATTGCATTGCAGGCTTGTTTCAGGAGAAATGTGACTGTTGTGACAATATATGCTTCATTGGGAGAGGAAGCTTTGTGTCATTCTTTGAATGAGACAGAGGTTGCGACTGTGATTTGTGGGCGTAAAGAATTGAAATCACTGGTAAATATTGCCGGGCAACTTGACTCTGTGAAACGCGTGATATGTATTGACAATGATGTCCCGTCTGATGCCTCATCTGCTCAACATGGATGGACAATCACTACATTTTCTGATGTTGAGAAGCTTGGTAGAGAAAATCCCATTGAGGCTGATTTACCCCTTTCTGCTGATGTTGCAGTTATAATGTACACAAGTGGAAGTACAGGGTTGCCTAAGGGTGTTATGATGACACATGGCAATATCTTAGCAACAGTGTCTGCTGTAATGACAATTGTTCCTAACCTTGGGACAAAGGATGTATATCTAGCATACTTACCAATGGCTCATATCCTTGAATTAATAGCTGAGAATTTGCTTGCATCTGTTGGAGGCTGTATAGGATACGGAACTCCTTTGACTCTAACTGATACATCAAACAAGGTAAAAAAGGGGACAAAGGGGGATGCCAGTGCATTGAGTCCAACTGTGATGGCAGCTGTACCAGCAATTCTTGATCGTGTACGTGATGGAGTTTTCAAGAAGGTAAATGCAAAGGGAGGATTATCAAAGCAGTTGTTTGATTTAGCCTATGCACGAAGATTGAAGGCGATTAATGGTAGCTGGTTTGGTGCCTGGGGATTGGAAAAATTTCTATGGAATTTTCTTGTTTTCAAAAAGGTCCAAGCAATTCTCGGTGGTCGTATTCGTTTTATACTATGTGGTGGTGCACCCCTTTCTGGTGACACACAAAGATTCATCAATATTTGTCTTGGTGCTCCAATAGGTCAAGGATATGGTCTCACAGAGACTTGTGCTGGTGGGACATTCTCTGATTTCGACGATACATCTGTTGGCCGTGTTGGACCACCTATTCCTTGCTCATATATTAAGCTAATCGACTGGCCTGAAGGTGGATATTCAACTACTGACTCACCAATGCCTCGTGGTGAAATAGTAATTGGTGGTCCAAATGTCACTCTTGGGTATTTCAAAAATGAAGAAAAGACAAGAGAATCTTACAAGGTTGATGAACGGGGAATAAGGTGGTTCTACACTGGTGATGTAGGGAGATTTCATGCAGACGGTTGCCTTGAGATTATTGATAGGAAAAAGGACATAGTTAAACTGCAACACGGAGAATACGTGTCCTTAGGAAAGGTTGAGGCAGCTATTCTTGGAAGCCCCTATGTGGACAACATTATGTTACATGCTGATCCTTTTCAAAGTTACTGTGTGGCACTTGTGGCTGTTTCTCGTCCCGCATTGGAAGAATGGGCATCAAATCAAGGGATTGCTTATTCTGATTTTTCAGAGCTGTGCGGGAAAGAAGAAGCAGTGAAGGAGGTGCATACATCACTTTTAAAGGAAGCAAAAAAGGCTCGTCTGGAAAAATTTGAGATTCCTGCAAAAATTAAATTGCTTTCCGATCCATGGACTCCTGAGACTGGTCTAGTCACTGCAGCTCTTAAGATCAAGAGAGATATCATTAGAAAGACTTTTCAAGAAGAGCTCTCAAAGTTATATGGCAAATAA 2085 0.4283 MNAYIIGFVVPLVIFLFKNAKSRKRRGLPADVAGDPGFAVRNHRVTSPMTSAWEGVTTLAELFERACREHHERLLLGTRELISREIETSSDGRSFEKLHLGEYKWITYGTVFESVSSFASGLAKIGHVREERAAIFAETREEWFIALQACFRRNVTVVTIYASLGEEALCHSLNETEVATVICGRKELKSLVNIAGQLDSVKRVICIDNDVPSDASSAQHGWTITTFSDVEKLGRENPIEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNILATVSAVMTIVPNLGTKDVYLAYLPMAHILELIAENLLASVGGCIGYGTPLTLTDTSNKVKKGTKGDASALSPTVMAAVPAILDRVRDGVFKKVNAKGGLSKQLFDLAYARRLKAINGSWFGAWGLEKFLWNFLVFKKVQAILGGRIRFILCGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPIPCSYIKLIDWPEGGYSTTDSPMPRGEIVIGGPNVTLGYFKNEEKTRESYKVDERGIRWFYTGDVGRFHADGCLEIIDRKKDIVKLQHGEYVSLGKVEAAILGSPYVDNIMLHADPFQSYCVALVAVSRPALEEWASNQGIAYSDFSELCGKEEAVKEVHTSLLKEAKKARLEKFEIPAKIKLLSDPWTPETGLVTAALKIKRDIIRKTFQEELSKLYGK 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03447 694 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 38 692 - -
Trre5g03447 694 SUPERFAMILY Acetyl-CoA synthetase-like 54 692 - -
Trre5g03447 694 Pfam AMP-binding enzyme 100 561 IPR000873 -
Trre5g03447 694 ProSitePatterns Putative AMP-binding domain signature. 252 263 IPR020845 -
Trre5g03447 694 Gene3D - 46 553 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03447 Trre-Chr5 31283044 31291187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03447 21 692 Acyl Lipid Metabolism Gene Families AT2G04350 64.444 0.0 923
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03447 K01897 - gmx:100778889 1214.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03447 5 31283044 31291187 Trre5g03447 5 31283044 31291187 ECH