LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre5g03445	ATGTTATTAAGGCATACCATTGCATGGCTCCTCTTTGTTGTTTCCAATTTGGCTTATGCTTCAAGCCTTAATCACACAAATAGAAGAAATGAAGTAATCATTGCTCATCATGGAGCTGTTGCGACGGATGATCGTCGATGTTCTAAGATTGGAATGGAAGTTATCCGTGAAGGAGGGCATGCAGTGGATGCAGCTGTGGCTGCTGCTCTTTGTTTAGGGGTAGTTAGTCCAGCTTCAAGTGGTCTTGGTGGTGGTGCCTTTATGGTTCTAAGTTTAGCTAATGGTGTAGCAAAGGCCTTTGATATGAGAGAAACTGCTCCTCATCTTGCTTCTAAGGATATGTATGGTGGCAACACTACTTTGAAGGCAACAGGTGGCCTTTCGGTCGGAGTTCCAGGAGAACTAGCAGGACTTCACAAAGCATGGAAACAACATGGAAAGCTTCCATGGGAGAGACTTGTAAAACCAGCTGAGATTCTTGCCTTTAGAGGGTTTAAAATATCACCATACCTTCATATGCAGATGGAAGCAACAGAGTCAGCTATATTGAATGACAATGGTCTTAGTAGTGTATTTGCACCTCATGGAAAACTATTGAAGGTAGGTGAAATATGTTACAATAAGAAACTAGCAGAAACTCTCAGAGCAATTTCAAAGTTTGGCCCTCAAGCTTTCTATGGTGGAATAATTGGCATTAATTTTGTTAAAGATGTTCAAAATGCTGGAGGGATATTGACCTTGAAAGATCTCAAAAAATACACTGTTAAACAAAAGGAACCTATATCTATAGATTTTCTTGGATTAAAGATCCTTGGTATGCCTCCTCCTTCAGGTGGGCCTCCAATGATGTTGCTGTTGAACATTCTAGCACAATATGAGCTTCCTTCAGGCCTTTCTGGTGCACTTGGGGTCCATAGAGAAATCGAGGCATTGAAACATGTATTTGCCGTGAGAATGAATCTTGGAGATCCTGATTTTGTAAACATAACTGAAGTTCTTTCTGATATGCTTTCTACTAAGTTTGCTAAAGTGTTGAAAAAAGACATTAATGACAATATGACTTATAATTCAAGTCATTATGGTGGCAAGTGGAATCAGCTAAATGATCATGGTACAAGTCATTTAAGCATAATAGATTTTGAGAGAAATGCTGTTTCCATGACTACAACAGTAAATGGATATTTTGGTGCAAAGATTCTTTCACCAAGCACAGGAATTGTATTGAACAATGAGATGGATGATTTTTCCATGCCTATAAAAAATGTTTCAAAGGATGTTCCACCACCAGCTCCTGCCAATTTCATCGTGCCGGGGAAAAGACCATTATCGTCCATGTCACCAACTATTGCCCTCAAGAATGGTGAAGTGAAAGCAGTAGTAGGTGCAAGTGGAGGGGCTATGATTATTGCAGCAACTTCAGAAGTTCTTTTGAATCACTTTGTCAAAGGAATGGATCCATTTTCTTCTGTAACTGCTCCAAGGTTCTATCATGAGTTGATACCTAATGTGGTGTATTATGAGAATTGGACAACTGTGAATGGTGACCACTTTGAACTCTCTTCTGATATAAGGGCAGCCCTTAGAAGTAAGGGCCATGTCCTTCAGGGACTTGCTGGTGGGACAATATGTCAATTTATAGTTTCAAACACTTATGAACATTCTGGAATAAATAAAGGTAGTGGAAAGCTTGTGGCAGTGAGTGATCCAAGAAAGGGTGGTTTTCCTGCAGGCTTTTGA	1737	0.4001	MLLRHTIAWLLFVVSNLAYASSLNHTNRRNEVIIAHHGAVATDDRRCSKIGMEVIREGGHAVDAAVAAALCLGVVSPASSGLGGGAFMVLSLANGVAKAFDMRETAPHLASKDMYGGNTTLKATGGLSVGVPGELAGLHKAWKQHGKLPWERLVKPAEILAFRGFKISPYLHMQMEATESAILNDNGLSSVFAPHGKLLKVGEICYNKKLAETLRAISKFGPQAFYGGIIGINFVKDVQNAGGILTLKDLKKYTVKQKEPISIDFLGLKILGMPPPSGGPPMMLLLNILAQYELPSGLSGALGVHREIEALKHVFAVRMNLGDPDFVNITEVLSDMLSTKFAKVLKKDINDNMTYNSSHYGGKWNQLNDHGTSHLSIIDFERNAVSMTTTVNGYFGAKILSPSTGIVLNNEMDDFSMPIKNVSKDVPPPAPANFIVPGKRPLSSMSPTIALKNGEVKAVVGASGGAMIIAATSEVLLNHFVKGMDPFSSVTAPRFYHELIPNVVYYENWTTVNGDHFELSSDIRAALRSKGHVLQGLAGGTICQFIVSNTYEHSGINKGSGKLVAVSDPRKGGFPAGF	578

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre5g03445	578	FunFam	Gamma-glutamyltransferase 5 isoform 1	260	364	-	-
	Trre5g03445	578	Pfam	Gamma-glutamyltranspeptidase	53	573	-	-
	Trre5g03445	578	Gene3D	-	367	578	IPR043137	-
	Trre5g03445	578	PRINTS	Gamma-glutamyltranspeptidase signature	128	146	-	-
	Trre5g03445	578	PRINTS	Gamma-glutamyltranspeptidase signature	146	165	-	-
	Trre5g03445	578	PRINTS	Gamma-glutamyltranspeptidase signature	273	292	-	-
	Trre5g03445	578	PRINTS	Gamma-glutamyltranspeptidase signature	437	452	-	-
	Trre5g03445	578	PRINTS	Gamma-glutamyltranspeptidase signature	396	414	-	-
	Trre5g03445	578	PRINTS	Gamma-glutamyltranspeptidase signature	60	85	-	-
	Trre5g03445	578	PRINTS	Gamma-glutamyltranspeptidase signature	372	390	-	-
	Trre5g03445	578	PRINTS	Gamma-glutamyltranspeptidase signature	244	260	-	-
	Trre5g03445	578	PRINTS	Gamma-glutamyltranspeptidase signature	461	478	-	-
	Trre5g03445	578	NCBIfam	gamma-glutamyltransferase	40	509	IPR000101	GO:0006751\|GO:0036374
	Trre5g03445	578	Gene3D	-	260	364	IPR043138	-
	Trre5g03445	578	PANTHER	GAMMA GLUTAMYL TRANSPEPTIDASE	27	578	IPR000101	GO:0006751\|GO:0036374
	Trre5g03445	578	FunFam	Glutathione hydrolase 1	367	578	-	-
	Trre5g03445	578	SUPERFAMILY	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	31	578	IPR029055	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre5g03445	Trre-Chr5	31210362	31213683	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre5g03445	1	578	Miscellaneous Gene Families	AT4G39640	65.690	0.0	766

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre5g03445	K18592		-	gmx:100797040	897.886