Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03406 ATGTTGCTTGGAAAACGTCCTCGGCCACCAGTTTTGAGAAGAACGAGAAGCATGAGTGGTGGTCTATCCGTGGACATGCAGACACCTGATAATAACACCAACAACTTAGAACCACATCACGAGGAACAACAATCATCAGTGATGATGTCTGATCATCATAATCCCCTGCATCCACATCCAAACCATGATGATCCACATGCGGTTGTGATGATGGGAACAGAAACACCCGCAGAATTAACGGTGACTGATGAGTGTTTAGTGGAAAAAAGTAGAGTGACGTTCCCTTCACACACAACCACAATCACTAATCATAATATTCCTCTGAGTGTGAGTGCACCTATCATACACAGTACACCTCACTTTCTCCGAACTTGTGGCCTCTGTAACTGTCGTTTGGCTCCCGGTCGAGACATCTACATGTATAGGGGAGATACTGCATTTTGCAGTTTGGAGTGTAGGGAGGAGCAAATGAAACAAGACAGGAGAAAAGAAAAGTGGAAAATGGCTCTTTCTAACAAAGAAGACCACCGTGTATCAACACCGTGCACAGCCACCGCTAAATCTTCCACGGCTGCTTGTACTTGA 585 0.453 MLLGKRPRPPVLRRTRSMSGGLSVDMQTPDNNTNNLEPHHEEQQSSVMMSDHHNPLHPHPNHDDPHAVVMMGTETPAELTVTDECLVEKSRVTFPSHTTTITNHNIPLSVSAPIIHSTPHFLRTCGLCNCRLAPGRDIYMYRGDTAFCSLECREEQMKQDRRKEKWKMALSNKEDHRVSTPCTATAKSSTAACT 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03406 194 MobiDBLite consensus disorder prediction 1 61 - -
Trre5g03406 194 ProSiteProfiles Zinc finger FLZ-type profile. 120 164 IPR007650 -
Trre5g03406 194 PANTHER FCS-LIKE ZINC FINGER 5 1 184 - -
Trre5g03406 194 MobiDBLite consensus disorder prediction 20 51 - -
Trre5g03406 194 Pfam zinc-finger of the FCS-type, C2-C2 117 163 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03406 Trre-Chr5 30771601 30772936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03406 - - tpra:123911030 294.664