Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03377 ATGCCACCACATATGACATATATACATAAAAAAGTAAAAATTGTTAATGAATCACACTCACTTCTCTTGAATCCAAACAGACTCATCATGGATTCTGGAAATAGTGGTAGTATGCAATCTTCAAGCTGTGGTGATGAAATTGAAGAGTATGATTCAAGAGGTGAATCAAATCAATTTTCTATGTTTTTAAACAATCCACCATTATCTACACCAGCAGCACCGGCAGCACCAAGAGCAAGATCAATAAGTCATCATCTTCTAAACCCACCACCACAATCTTCTTCTTTACAACAACAAATGTTTGATCCATTAGCCAATTATTACATGGATTCATTACAAAAAGCATCATCAACACAATCAAACCAAAACTCATTTCTAAATCTTGACATGATGTGGTCTAAAGGTGCTACTACTACAGCTAGATCTGAACAAAACAACAATGATCTTAGCAGTTTAATGGTACCATCATCTTCATCAACAACATCTTCTCATCAAAATCAACAAGCATTCTTATTAAGTCAAGGGATGATGGTTGGTCAAACAAGAGAAAACATTAACGTTGTTGGTTCTGTTCCCACCACACATCATTCTCTGTCACTAGATCATCATCAACAACGTGGAACATCCCTCACCAATGATCAACAAAATCTTCAAAACAATAATATGGGTAGTAGAAATCCTAAGAAAAGATCAAGAGCTTCAAGGCGTGCACCAACAACAGTTTTAACAACAGATACAACCAATTTCAGAGCTATGGTTCAAGAATTTACTGGTATTCCAGCACCACCATTTTCTTCACCTTTTCCAAGAACAAGATTAGATCTTTTTGGTTCTTCAAGATCTATCTCATCATCTCATATGGACCCTCCACAACAACCACCTTATCTTCTTCGACCTTTTGCTCACAAAATTCAATCTCCTCATAATCATCACTCTTTTCCACCTTCTTCTTCTTCCATGGTGGAAAATTTACTGGCTTCTAATAATTCAGCCACTATTAACTACCATAATTTATCTCAGCATCAGCAGAATCATCCTCCTCTAATACAACAACACAACCAAATTATCGGTTTTCAATCAATTTCTCAAACACCAACAACAAAATACCAAATTGGGTCCCACCAACAACCCTCCTTGGAAATCACGCCCAATGTTGATTCTCATATCAAAAGGGGTTCTGTTTTTGAAGATTTAGCTCATGTTAACAACACCAACATTGGTAATGTTGTTCATCATCGTCAGAACATGGTTCCCACATCATCGGACCGAGTCAACAACAACATGTGTAATTCTTCGTCGGAGAATCAGTGGGGTACGAGAACAAGTAGTACTAGTATTAATGGTGGTGATCATGGAGGAATTCTTGGGTCTTTGAGTGGCATTGAAGAGAGAAATTGTACATCAGATTTTGGTTTAGTGAAAGGACAAGAATGTGCTGTGGTGGCTACAACAACAAGAGGTGAAGGTACGGTGGAATCATGGATTAATTGTTCTTCTTCTGATTAA 1506 0.3725 MPPHMTYIHKKVKIVNESHSLLLNPNRLIMDSGNSGSMQSSSCGDEIEEYDSRGESNQFSMFLNNPPLSTPAAPAAPRARSISHHLLNPPPQSSSLQQQMFDPLANYYMDSLQKASSTQSNQNSFLNLDMMWSKGATTTARSEQNNNDLSSLMVPSSSSTTSSHQNQQAFLLSQGMMVGQTRENINVVGSVPTTHHSLSLDHHQQRGTSLTNDQQNLQNNNMGSRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFSSPFPRTRLDLFGSSRSISSSHMDPPQQPPYLLRPFAHKIQSPHNHHSFPPSSSSMVENLLASNNSATINYHNLSQHQQNHPPLIQQHNQIIGFQSISQTPTTKYQIGSHQQPSLEITPNVDSHIKRGSVFEDLAHVNNTNIGNVVHHRQNMVPTSSDRVNNNMCNSSSENQWGTRTSSTSINGGDHGGILGSLSGIEERNCTSDFGLVKGQECAVVATTTRGEGTVESWINCSSSD 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03377 501 MobiDBLite consensus disorder prediction 137 164 - -
Trre5g03377 501 MobiDBLite consensus disorder prediction 419 450 - -
Trre5g03377 501 MobiDBLite consensus disorder prediction 193 239 - -
Trre5g03377 501 Pfam VQ motif 236 263 IPR008889 -
Trre5g03377 501 PANTHER VQ MOTIF-CONTAINING PROTEIN 30 402 IPR039609 -
Trre5g03377 501 MobiDBLite consensus disorder prediction 193 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03377 Trre-Chr5 30337905 30341821 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03377 - - psat:127082889 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03377 5 30337905 30341821 Trre5g03377 5 30337905 30341821 ECH