Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03369 ATGGATTCATCCCATATACATGCTTATGCAAACTTCAGTTGTGAACTAAAAATAATACAAGCTCGAAACGTTGAATTCATCAAGTCTACGAAAAACTTGTTTGCAAGGTTGTATCTTCCAACAGGAAGCAACAAAAGAATTCAACTCAACAGCAAAAATGTTTCATCCAAATCATTACCCTTTTGGGACGAATCTTTTAATCTAGATAGTTCTTGCCCCCAAGAATTCTTAGCAAACCTTAATCAACAAAGCCTAGTATTGGAGCTAAGGCAAAGGAAGATATGGGGGTCACAGCTTATTGGTAAAGGTGAGATTCCATGGAAGGTGATTCTTGAATCACAAAATATGTTGTTGAAAAAATGGTTGAAAATGGATTTGGTGGATGGAAGTGATTACAAAGAGGGTATGTTCACAACACCAGAAGTGGAAGTGGAGATTAAAATAAAAGTGACTACGGTTGCTGAGATGGAAAAACAGAATAAGAGAAGGTTGAATAATTGGAATGAGTGTGGATGCAAAAATGGACATGATCATCAAGCTTGGTGCAACACTGAAGATTGTGATATATTTGCGTTTGGAGCAGCTTTAGAGGCTTTTTGA 600 0.3683 MDSSHIHAYANFSCELKIIQARNVEFIKSTKNLFARLYLPTGSNKRIQLNSKNVSSKSLPFWDESFNLDSSCPQEFLANLNQQSLVLELRQRKIWGSQLIGKGEIPWKVILESQNMLLKKWLKMDLVDGSDYKEGMFTTPEVEVEIKIKVTTVAEMEKQNKRRLNNWNECGCKNGHDHQAWCNTEDCDIFAFGAALEAF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03369 199 PANTHER OSJNBA0006M15.15 PROTEIN 1 198 - -
Trre5g03369 199 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 131 IPR035892 -
Trre5g03369 199 Pfam C2 domain 15 115 IPR000008 -
Trre5g03369 199 CDD C2 15 123 - -
Trre5g03369 199 Gene3D C2 domain 3 150 IPR035892 -
Trre5g03369 199 ProSiteProfiles C2 domain profile. 1 122 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03369 Trre-Chr5 30252317 30252916 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03369 - - gmx:100807677 265.774