Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03364 ATGAAAAAGAAACAATCTTTGCGTTCCAAAGCCACCAACTTTGTCTCTGTCCTTCTCAACCCCATCTCTGATCCTGATCCTCATCAACCCTCCAAACACCCTCCATCTTCTTCAGAAGGAGTAGGTGAATTAAAAAAAAGTGGTGAAGAGGACTCTAAAGAGAATGATAACTCAAATGGACATAATGATGATAAAGGTGAACCTGATAATAATCATCATAATAGCCCTTTACCTAATTCATCCATTGAGGAAAATGGTGGGAAGAAAAGTTTGTTTTCTAGAAGTAAACAATCAGTTGGTAGAGTTATTCGTCGAGCTGTAAGAATTCGTGGATTTCGCCATCAGGATCAGAAGGATAGTAATAATAATCTTGAAATGAAAGTTCAAGATAGGAGGAAAGAATCACTGCCTGTGAAAGAGTCATTGCCTGTGGCTTTGGATGATTTGCCTGGAATTTCTGAACCTTCGGTTCTTGTTTCGGAAAGTATAAGGAACGTTCTTTATGCTTCTCTTCCGCCGCTTATGCATGGAAGAAAATGGCTGTTGCTATACAGCACTTGGAGGAATGGTATATCGCTTTCAACTCTTTACCGGAGAAGCATGCTTTGGCCTGGATTGAGTTTACTGCTGAGGCAAATTTCTTTCAATTTACAAATATGTATTAGTTTTCAATCGATGTTAGTGATTCCATTCTATAGGTTGTTGGAGATAAAAAAAGGAGCAGTGTTTGGCAGCTTGGTTGAAACACCTCTCAAACCATCCAACAAGAGAAAATATCAGGGAACAAACAGTACTTATGTTTTCACAAATATCTCTGGTGATCCTATCATATATCGTCCAACAGGGGTAAACCGTTATTTCACACTTTGCAACATTGACTACATAGCAGTTGGCGGAGGAGGTCATTTTGCGCTTTATCTGGACGGTGATCTATTGAATGGCTCGAGTTCAGTATCAGAAACTTTCGGAAATCCTTGCCTTGCAAATTCTCAGGACTTCGAAGTGAAGGAAGTCGAGTTGTGGGGCTTTGTACAGACTTCAAGATATGAGGAAATGCTTGCATTGAGCAGAACTGAGGTGCCAGGGATCTGTCGATGGTAA 1101 0.4015 MKKKQSLRSKATNFVSVLLNPISDPDPHQPSKHPPSSSEGVGELKKSGEEDSKENDNSNGHNDDKGEPDNNHHNSPLPNSSIEENGGKKSLFSRSKQSVGRVIRRAVRIRGFRHQDQKDSNNNLEMKVQDRRKESLPVKESLPVALDDLPGISEPSVLVSESIRNVLYASLPPLMHGRKWLLLYSTWRNGISLSTLYRRSMLWPGLSLLLRQISFNLQICISFQSMLVIPFYRLLEIKKGAVFGSLVETPLKPSNKRKYQGTNSTYVFTNISGDPIIYRPTGVNRYFTLCNIDYIAVGGGGHFALYLDGDLLNGSSSVSETFGNPCLANSQDFEVKEVELWGFVQTSRYEEMLALSRTEVPGICRW 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03364 366 MobiDBLite consensus disorder prediction 1 97 - -
Trre5g03364 366 MobiDBLite consensus disorder prediction 110 132 - -
Trre5g03364 366 MobiDBLite consensus disorder prediction 72 97 - -
Trre5g03364 366 ProSiteProfiles TLDc domain profile. 157 344 IPR006571 -
Trre5g03364 366 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 38 344 - -
Trre5g03364 366 SMART 109ultra 156 344 IPR006571 -
Trre5g03364 366 MobiDBLite consensus disorder prediction 43 71 - -
Trre5g03364 366 Pfam TLD 182 343 IPR006571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03364 Trre-Chr5 30210570 30213066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03364 234 351 EF-hand Containing Proteins AT5G06260 25.197 1.69e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03364 - - gmx:100804124 414.846