Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03277 ATGTTCCATCTTAATGGGAAACATTCATGTTATGGAGAGTATCTGAATCAGAATTTTGATTCCGTACCACCCAAGGCCAATTTCTTACATGCTACAACTGGTAACCAGCACCAGCTCACGGCAGACTATCCAGGCGAACCAGGATGGGATGATAATTCAGCCACATTTCAAATGACAATTGCATCGAATAACCTGCATGGAGATTACCAGCTTGCAAATGGTTATGGACATGATAGCGCAGAAGATGTTCTTAGGAGACATAGAAATAGCTTTATCACAATGGAGGATTTCAAATTTCTATATGAACGCGGAATAAATACCGCGAGGATACCAGTTGGGTGGTGGATTGCTTATGATCCTGATCCTCCAAATCCATTTATTGGAGGAACTCTTGAAGCTCTAGATAATGCATTTTCATGGGCACAAGAATATGATATAAAATGCATAATTGATCTTCATGTCGCTCCTGGTTCACAAAATGGGATGGAGCATAGTTCAAGCATAGATGGATTTACAGACCGGCCAACTTCTCCAGATTACATTTCAAAGTCATTGCATGTTATTGAATTTTTAATTTCTAGATATGCAAAGCATGCTGCCTTGCTTGGAATTGAGCTTTTGAATGAACCATCTGCTGCCACAGTTCCCTTAGATATTTTAGTTCCCTATTACAAACAGGGCTACCAAATTGTTCGGAAATACTCTTTGTCGGCTTATGTGATAATTTGCCAGAGAATCGGCAATGCAGATCCTTTAGAGCTTTATCAAGCCAACATAGGATCTACCAACTTAGTTATGGATTTGCATTTCTACAATCTCTTTGACAAATTCTTTGTTAATATGAGTGCCGGCGATAATGTACAATACATATATAAAAGTCGGGAAGGTCTGTTGCAGGCCTTCAACAATTCAAATGGTCCACTCGTTTTTGTTGGAGAGTGGGTGAATGAGTGGAATGTGGCGAATGGATGGCAAACAGATTATCAGGACTTCGGAAAGGCACAGTTAGACGTCTATAACACAGCTTCTTTCGGCTGGTGTTATTGGACTTTAAAAAATGACAGGGAACATTGGGATTTTGAATGGAACATTAGGAACAACTATCTTCAATTAGGTAACTCATCCAGCAAAAAACTTTGGGATTGTTTGGATTGGCTTGCACTTGGTTTTGTCTACGCGTTGTATTTCGGATTATGA 1197 0.396 MFHLNGKHSCYGEYLNQNFDSVPPKANFLHATTGNQHQLTADYPGEPGWDDNSATFQMTIASNNLHGDYQLANGYGHDSAEDVLRRHRNSFITMEDFKFLYERGINTARIPVGWWIAYDPDPPNPFIGGTLEALDNAFSWAQEYDIKCIIDLHVAPGSQNGMEHSSSIDGFTDRPTSPDYISKSLHVIEFLISRYAKHAALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSLSAYVIICQRIGNADPLELYQANIGSTNLVMDLHFYNLFDKFFVNMSAGDNVQYIYKSREGLLQAFNNSNGPLVFVGEWVNEWNVANGWQTDYQDFGKAQLDVYNTASFGWCYWTLKNDREHWDFEWNIRNNYLQLGNSSSKKLWDCLDWLALGFVYALYFGL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03277 398 PANTHER FASCIN 27 371 IPR010431 GO:0007015|GO:0051015
Trre5g03277 398 ProSitePatterns Glycosyl hydrolases family 5 signature. 202 211 IPR018087 GO:0004553|GO:0005975
Trre5g03277 398 SUPERFAMILY (Trans)glycosidases 63 370 IPR017853 -
Trre5g03277 398 Gene3D Glycosidases 48 380 - -
Trre5g03277 398 Pfam Cellulase (glycosyl hydrolase family 5) 92 354 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03277 Trre-Chr5 29006004 29008603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03277 - - tpra:123911124 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03277 5 29006004 29008603 Trre5g03277 5 29006004 29008603 ECH