Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03274 ATGAAGAAACTCAAAGAGGTAATAGGAAAATTGAAGGACAAGGCATCACAAAGCAAAGCTGCAATTTTTTCCAAACACAAAACTCTTTCACTCCTTCGCGCCACAACCCATGATTCTTTCACCCCTCCAAAACACAAACACATCTCCACCCTTCTTTCCTCTGGAGACGGTTCACGCGCTACCGCATCTACTGCGGTAGAGCTTCTCATGGACCGTCTCCAAACAACTCACAACTCAGCAGTAGCTCTCAAATGTTTGATCGCCGTTCACCATATTATCAAACACGGCACCTTCATTCTCCGTGATCAGCTCTCCGTTTACCCTTACACCGGTGGCAGAAACTACCTCAATCTCTCTAACTTCCGAGACAAAACAAATCATGTTTCTTGGGAACTCTCTTCTTGGGTTCGGTGGTACGCGCAATACATCGAACACCTTCTGTGCACTTCTAGAATTTTAGGTTTCTTCATCGGAGAAACCACGCCGTTTTGTAAACCACAAGAAGTGAGAGTTTTGGGTGTTACTAATAATGATCTGTTGAGAGAAATGGATTCCTTGGTGGCGTTGATGGAAGGAATTGTGAAAAGACCGAATACTCCAACAAGTGAAAATAACAAGGTGGTTGTTGAGATAATGGATTTGGTTGAAGACGATGGGGTTGTTGTTCTGAGTGAAATTTTGGTTAGAGTTAATGAATTTGGGGAGAGGGAGAGATTGGGTTGTCTTGGTTTTGGAGAAATTGTGGAATTAGTTTGTGTATTGAAGAGATTGGAAATGTGCAGAGAGAGAATGATGGTGGTGGAGGAGAAGGGATTTTGGGATTCAGTGAGAGAATTGAAGGAAAAAGTTGGAAGGATGAAGGTGTATACGGAAGAAAGGAAGGTTTACGGAAAGACGACAAAAGATAGAAGAACTGAGTCTGATAGGTTTGATGACAGAGTTCTTAATTCTGTTGGTTCCATTATGTTTCCTTCTTCAAGGTTTTTCTAG 990 0.4222 MKKLKEVIGKLKDKASQSKAAIFSKHKTLSLLRATTHDSFTPPKHKHISTLLSSGDGSRATASTAVELLMDRLQTTHNSAVALKCLIAVHHIIKHGTFILRDQLSVYPYTGGRNYLNLSNFRDKTNHVSWELSSWVRWYAQYIEHLLCTSRILGFFIGETTPFCKPQEVRVLGVTNNDLLREMDSLVALMEGIVKRPNTPTSENNKVVVEIMDLVEDDGVVVLSEILVRVNEFGERERLGCLGFGEIVELVCVLKRLEMCRERMMVVEEKGFWDSVRELKEKVGRMKVYTEERKVYGKTTKDRRTESDRFDDRVLNSVGSIMFPSSRFF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03274 329 CDD ANTH_N_AP180_plant 29 150 - -
Trre5g03274 329 SMART enth_2 25 157 IPR013809 -
Trre5g03274 329 ProSiteProfiles ENTH domain profile. 19 157 IPR013809 -
Trre5g03274 329 Gene3D - 3 156 IPR008942 -
Trre5g03274 329 Coils Coil 1 21 - -
Trre5g03274 329 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 231 IPR045192 GO:0048268|GO:0072583
Trre5g03274 329 FunFam Putative clathrin assembly protein At4g40080 3 156 - -
Trre5g03274 329 Pfam ANTH domain 31 215 IPR011417 GO:0005543
Trre5g03274 329 SUPERFAMILY ENTH/VHS domain 30 155 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03274 Trre-Chr5 28969806 28970795 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03274 - - tpra:123917017 375.555