Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03254 ATGGGGACCGTTACTCGCAGTACTGGTAGAAAACCAAGTGAAATTATGAGGATAATTGTGACCACTTTTATTGGAGTAGTTTTTGGCTTCTTTCTAGGAGTATCATTTCCAACATTATCATTAACAAAGTTCAATCTCCCATCTGGGTTGCTTCCCTCGATTGATCTCTCTTACATTGAAGACAGATATACAGGTCGTCATGCTTGGTCTTTTATGAACAATGGTAACAAAAGATCTTCGCGACATTATTTATCAAATGATACATCAAAGATTTGGGTTCCATCAAATCCAAAAGGAGCAGAAAGTTTACCCCCCGGCATTGTTGAAGCTGAGTCCGACTTTTACTTGCGTAGATTGTGGGGAAAACCCAGTGAGGACTTAACACTCAAGCCAAAGTACCTTGTGACATTCACTGTTGGCTATGATATGAAAAAGAATATTGATGCAGCCGTGAAAAAGTTTTCAGAGAACTTCACAATCCTTCTATTTCATTATGATGGCCGAACTAATGAATGGGACGAGTTTGAATGGTCGAAAAAGGCTATTCATGTGAGTGCTCGCAAACAGACCAAATGGTGGTATGCTAAGCGGTTTTTACATCCTGACATCGTGGCTCCATATGACTATATATTTATATGGGATGAAGACCTAGGCGTTGAGCATTTTAATGCTGAAGAATACATAAAACTGGTGAAGAAGCATGGCTTGGAGATTTCACAGCCTGGTTTAGAACCTAATAAAGGGTTGACATGGCAAATGACAAAAAGAAGAGGAGATAAAGAAGTTCACAAAGTGACGGAGGAGAAACCAGGATGGTGTTCCGACCCTCATTTACCTCCTTGTGCAGCGTTTGTTGAGATTATGGCCCCAGTCTTCTCGCGAGAAGCATGGCGTTGTGTGTGGCATATGATTCAGAATGACTTGGTCCATGGGTGGGGTCTTGATTTTGCTGTTAGAAGATGTGTTGAGCCTGCGCATGAGAAGATTGGAGTTGTTGATGCTCAATGGATTGTTCACCAAGGTGTTCCCACTCTAGGGAATCAGGGTAAAACAGAAACCGGAAAAGCACCATGGCAGGGGGTGAGGGAGAGATGTAGGAGGGAGTGGACCATGTTTCAGAGTCGGTTAGCGAATGCAGAACATGCGTATTTCAAGTCCGGCGGAGGTATTTCTATGTCTAATTCGACTGCTCATTAG 1197 0.4261 MGTVTRSTGRKPSEIMRIIVTTFIGVVFGFFLGVSFPTLSLTKFNLPSGLLPSIDLSYIEDRYTGRHAWSFMNNGNKRSSRHYLSNDTSKIWVPSNPKGAESLPPGIVEAESDFYLRRLWGKPSEDLTLKPKYLVTFTVGYDMKKNIDAAVKKFSENFTILLFHYDGRTNEWDEFEWSKKAIHVSARKQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEEYIKLVKKHGLEISQPGLEPNKGLTWQMTKRRGDKEVHKVTEEKPGWCSDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFAVRRCVEPAHEKIGVVDAQWIVHQGVPTLGNQGKTETGKAPWQGVRERCRREWTMFQSRLANAEHAYFKSGGGISMSNSTAH 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03254 398 PANTHER OS06G0731900 PROTEIN 11 386 IPR007877 -
Trre5g03254 398 Pfam Protein of unknown function (DUF707) 95 381 IPR007877 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03254 Trre-Chr5 28715883 28718597 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03254 - - gmx:100778486 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04923 7 56279318 56282572 Trre5g03254 5 28715883 28718597 PCT