Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03241 ATGTTATTTCCAATCCCAACAACAACGGCGAGTGCCACCTTATTGACCCTTCCTCCTCCTTCTTCTCATTTCTCCTCCAAACTTAACACCTCTGTTACTCCCAAACAAATCCAACTCAAACTCTCCGTTAACCCCCCTTTAACGGCATCAACACCTTACGGCGTCAACGAAAAACTCAACAATCTCGCCTCCGAATTCGCCTCTTTAACCGAACCCATCGATCGAGTAAAAAGGCTATTACACTACGCATCTCTCTTGCCTCCGTTAGACCGGTCCGACCGGGTTCCAAAGAATCGTGTTTCGGGTTGTTCGACGGAGGTTTGGGTGGTGGCCCACATAGATAAAGGTAGAAAAATGAGATTTAAAGCAGACAGTGAATCGGAAATATCGAAGGGTTTTTGTTGGTGTCTTGTTTGGATGTTTGACGGCGCGGAACCTGAGGAGGTTCTTACGGTGGAGAGAGATGATTTGGTTGGTATGAATGTAGGGTTGAATAATGTTAAAGCACGCTCTAGGATTAACACGTGGCATAATGTTTTTTTTGCCATGCAAAAAGCTACTCAAGATTTGATTTGA 576 0.4479 MLFPIPTTTASATLLTLPPPSSHFSSKLNTSVTPKQIQLKLSVNPPLTASTPYGVNEKLNNLASEFASLTEPIDRVKRLLHYASLLPPLDRSDRVPKNRVSGCSTEVWVVAHIDKGRKMRFKADSESEISKGFCWCLVWMFDGAEPEEVLTVERDDLVGMNVGLNNVKARSRINTWHNVFFAMQKATQDLI 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03241 191 Gene3D - 42 189 - -
Trre5g03241 191 Pfam Fe-S metabolism associated domain 64 185 IPR003808 -
Trre5g03241 191 SUPERFAMILY SufE/NifU 48 189 - -
Trre5g03241 191 PANTHER SULFUR ACCEPTOR PROTEIN CSDE 38 190 IPR003808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03241 Trre-Chr5 28541696 28542271 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03241 - - var:108328633 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03241 5 28541696 28542271 Trre5g03241 5 28541696 28542271 ECH