LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre5g03235	ATGGTCACTGTGAGTAACAAAGCGGCAACATTGACGACGATGTCCGACAAAGTGAGACTCCGATTACTATTCGACGATCGTCGCATTCTGAGCAAATCAAAGAAAAAAGAAGGCTTGAAGCGTTGCTGGTTTCTTCTAAAACCTCATCTCACAACCATCTCCGATCTCACCTCTCATCTCCAAAACCTTTTCCGTCTTAACCGTACATGTCCCGACGGCATCACCTTATCGATGGATGGCTTTGTTTTACCATCATTTGAGTCGACGTGTATTTTGAAGGATAAAGACATTGTGTGTGTGAGAAGAAAAGGAAGCTCATTGACTGATAGTAAATCTGCAATGCTGTTATCTGAAACACATGAGAATCAATCTATAGAGGTTCCAAAACTTCTCGCAATTGAGGGGTTTCAAGAGGAAAAGGGAGAATATGAAAGTCTTTCCGAAGATGACGATGATGGTGACAATGATCAATCTGAAGATGTAGTTTATGTGGAAACTAAACCAGATGAGAATGCAAACTCAAAGAAGAGAAAAGCGTCGAAGAAGCTCAAGAGTCCTAGACAGAAGAAGATTAAGATGTCTACTACTGAAAACATAGCTGTCCTTCCCGAGGAGGAAAATGGAAGTTTTAAAGATAAGAAGGGCATTGGCAAGTCATCCACTTTATCTAGTCAGAAAAATGACAAAAGTGGGTCAACAAGCGATGAAACAAGGTCTCTTCAGCCCCACGATGAAGGTGAAACTAAAAAGTTGCCTAGCAGAAGTGCTCGACGGAAAAAAGCCAAGAGAAAATGGTTGAGGGAACTAAAATTAAAGGAAAAGGAGAAGGATAATGATAAGGAGAAGGATACCGATAAGGATCAGGAGAAGGAGAAGCTTCGTCCGAGTCAGGTACTTGAAAAAAATGATCACCAGTCACCTACCAACAAAGATAATAATTGCATAGTTTCTGATGTGAATAAACAATCCGATGAAGAAAGTGGAGCAGAGGACGACATGGTTCCTGTGGAAATCAAGCCAGGGCACATTCGGTTTCAGCCCCGTGGAAAAGATATTGCACTGCCAGAGAATCAGTTCCCAGTGGACACATTTCAGTGGAATGGTACTACCAGCAAAAAGAAGGGCCAGAAATGGGGTAAAGAGAGGACCTCATCTCATAAAAACGATGACTATGAGAAGTCCAGTCAAGACTGTTCTGCTGTTCAGTGGAATGGTACTACCAGCAAGAAGGGCCAGAAATGGGGTAAAGAGTGGACCTCATCCCATAAACAAGATGAATACAAGCAACCCAGTCAAGACTGTCCTGTTCAGAATTCTGGGAAAAAACAGACATTCAACGCCGTAGATTTTGAAAAGCTTACACCTTCTACAGATTTGCCTAAGGAAGGCAATGTTATTGCTTATAGATTGATTGAATTATCAGAAACTTGGACTCCTGAGATCTCCTCTTTCAGAGTTGGGAAAATAACGCAGTATGATAGTAAATCAAACAAGATACAGCTGGCGCCAGTTTCTGAATTTCCATTTGAGTTTAGGAAGAAAAGAGATGTTGACATAGATGACGAAATATCACCTGCACAGTCTGATCCATCCCCTTATCAGGAAGATGGTTCTTTAGAGATTGATTATGTATCTCTAGCTGATGTTCGAATTATTAAGCATGGCCATTCTGATTTGGCAACTGTAGTTGCTTCAAGCAATGCTTTTGTCACTCCTACAAAAGCAACTAACAATAGCACTGATGAAAAACTTGCGGGTAATCAAACTGCTCTGGGAAGCTCAAAGCCACAAATGGAGGGCCATGCCCCTGCTAAAGAAAATGGGGAAGTCAATGTTTGGGATGAAATCAACGAGGCATTAAAAGCAAAGAAGGCCAGGCTGTCACAGGAGGAGGATCGCTGGAAGAAAGATACTTCAGGCAATAAGTCATGGTCTCAGAGAGCAAGATGCAGCGCACTTGGTCCCACAATGGCACTTTTAAGGTCGCAGAATGGCTTTAAGAAGTAA	2007	0.4195	MVTVSNKAATLTTMSDKVRLRLLFDDRRILSKSKKKEGLKRCWFLLKPHLTTISDLTSHLQNLFRLNRTCPDGITLSMDGFVLPSFESTCILKDKDIVCVRRKGSSLTDSKSAMLLSETHENQSIEVPKLLAIEGFQEEKGEYESLSEDDDDGDNDQSEDVVYVETKPDENANSKKRKASKKLKSPRQKKIKMSTTENIAVLPEEENGSFKDKKGIGKSSTLSSQKNDKSGSTSDETRSLQPHDEGETKKLPSRSARRKKAKRKWLRELKLKEKEKDNDKEKDTDKDQEKEKLRPSQVLEKNDHQSPTNKDNNCIVSDVNKQSDEESGAEDDMVPVEIKPGHIRFQPRGKDIALPENQFPVDTFQWNGTTSKKKGQKWGKERTSSHKNDDYEKSSQDCSAVQWNGTTSKKGQKWGKEWTSSHKQDEYKQPSQDCPVQNSGKKQTFNAVDFEKLTPSTDLPKEGNVIAYRLIELSETWTPEISSFRVGKITQYDSKSNKIQLAPVSEFPFEFRKKRDVDIDDEISPAQSDPSPYQEDGSLEIDYVSLADVRIIKHGHSDLATVVASSNAFVTPTKATNNSTDEKLAGNQTALGSSKPQMEGHAPAKENGEVNVWDEINEALKAKKARLSQEEDRWKKDTSGNKSWSQRARCSALGPTMALLRSQNGFKK	668

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre5g03235	668	PANTHER	COILIN P80	14	398	IPR024822	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	323	337	-	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	624	650	-	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	415	429	-	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	238	252	-	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	395	414	-	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	573	595	-	-
	Trre5g03235	668	Coils	Coil	617	637	-	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	374	394	-	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	308	322	-	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	573	610	-	-
	Trre5g03235	668	Coils	Coil	262	291	-	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	253	267	-	-
	Trre5g03235	668	Pfam	Coilin N-terminus	18	283	IPR031722	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	214	237	-	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	268	307	-	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	163	337	-	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	624	642	-	-
	Trre5g03235	668	MobiDBLite	consensus disorder prediction	353	440	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre5g03235	Trre-Chr5	28473918	28480702	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre5g03235	K13150		-	gmx:100776892	652.899

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Trre5g03235	5	28473918	28480702	Trre5g03235	5	28473918	28480702	ECH