Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03220 ATGCCACTTTTCACTTATGTTTCATACACGGGAGCTCTGAAATTGGAACTTCATCACTCTTCACAAAGAGTAGATGACAATGACATTGCTGCTAATCTTGATCCTGAACCTGATTGGAGTTTCGATGCTCTTGTCTCCGAGCTCAATGCTTTAGAAGATAAACTCGCCGTTACTTCTTCCACTCAACCATTGCATTTTCATAAAACAACTTCAAGGCTTAACTTATCCGGTGGGAAAGAAATTGAGAAAGGTAGAACGTTTGTATTTTGTGCCCCTGAGTATGAGACGGAGAGCGAGGACGACGATGACAAAGCGTTAGTAGTAGCCAGCACCGGCAAACGCTTCAATTATGATGAACTTTATCCGAGTGACAGTGATGATTCCGATGTTGACCCTGCTTTTGAAGTGCAACCTTACCTAATGAATAAAGTTGGGGAGGTAGAAGGTGCCTTAATTGAATTGACACAGGAACATCAGCTGAGGGTTAAGGATGAAATTAGGAATAAGATATCAGTATTAGAGACATCTCTACTGAATGAAAGTCAGAACTCCATTTCTTCCCTTCTTCGAGTTGAGAAATTCAAAGAAACAAGGCAGGAGTTGGATAAAAAGTTTGACACTCAATATCAGCGGCAAATTGCAGAAGTACTTGATAGTCACTTGACAGCTGTTCAACGGGACCGGGAACTCAGATCACAAATAGAAGAAAGGAAAATAAGAAATGATGCAGCGTATGAAGAAGCCAAGAGAAAGGCTGCTATGCAAGAGGAAAAGCAGCAGCAAGAAAAGGCTAAAGCTGAAGCAGAGGCCAAACTTAAAGCTGAGGAAGTAAAACAAGCTGCATTGGAAGCTGAGAGAAAAGCAACAATGGAAGCCAAAACAAAGGCAGCAATGGAAGCTGAAAAAAGAGCAGCAATAGAAGCTGCAAAAAGAGCAGAAAAGGACGCCATAGAAAGTTCCAAAAAGGTTACTTCTGGAGTGGCCCAAGATACCGAATCAAGCCTATTAAATACTGAAACCAAGGAATCAGGTTATGTATATCGAGCTGCAGCAAGTGCATTAAATATAGAGCATGGTAGGCTACAGAAACTGAAAGAGCTGTGTGAGGGAAACCAAGTTATGAGATCAAGTTCTAAACAGGATTATGCCCACCATGAGAGTCATATTTCCCGGAATATAAAGACAATAAGGGGAATAAGCAACAATGTAAGATCAAAAGCACGTGAACTTATTAATCTTTTGAATGATCGTCAATGCCCTCAATCATTCAGTGCTGAGATATTTGTTAAAAAGGTTGTTTCATCCTGTGCAAGCCCTGGTAGTGCTCCCTTTGCAATTGCCTATGTCATTGTTCTCGTTACATCTGAGGTCCCATATGTAATGGATCTTTTGCTGGCTGAGCTTCATAGGGCCTGCCTTTACACCGTCCCAAAGCACATGGTCTACAAAAAGTCTATCTTTCAATCAAAAGAGGCATACTTCAGAAGTATCGGTTATCGAGAAGACAGTGAAAAGTTGGAGAGTACAGAAGATTATTTAAAGCGGCTAGAATCATATATGAAGCTGTACGGTGCACTGGTTCAGACTGAAATTCCGAACATTCGAAATTTGCACGGCTTGCAAGAAGGTTGGGCGTGGCTTGCAAGGTTCTTGAATTCTATGCCAGCCAATCTTTATACAGCTGTTTCACTCGATACATTCTTGCAAATGGCAGGCTTTGCTCTATTTAAAAGATATAAATCTCAGTTCGTAAAGATGTTGAACGTTATCTCAGACAAGTTTTTAGTTGATCTGAAATCACATAATGCACCAGAATCGACGAAGATTGTTGCGAATATACAGGCTTATATAGAAGATAGAAAGTTCCGTCAAGTGCCAGAAGGAAGGAACATGCAGTCAGATACGTTATCAAGAGTAATAATCCACAAAATTTAG 1935 0.4062 MPLFTYVSYTGALKLELHHSSQRVDDNDIAANLDPEPDWSFDALVSELNALEDKLAVTSSTQPLHFHKTTSRLNLSGGKEIEKGRTFVFCAPEYETESEDDDDKALVVASTGKRFNYDELYPSDSDDSDVDPAFEVQPYLMNKVGEVEGALIELTQEHQLRVKDEIRNKISVLETSLLNESQNSISSLLRVEKFKETRQELDKKFDTQYQRQIAEVLDSHLTAVQRDRELRSQIEERKIRNDAAYEEAKRKAAMQEEKQQQEKAKAEAEAKLKAEEVKQAALEAERKATMEAKTKAAMEAEKRAAIEAAKRAEKDAIESSKKVTSGVAQDTESSLLNTETKESGYVYRAAASALNIEHGRLQKLKELCEGNQVMRSSSKQDYAHHESHISRNIKTIRGISNNVRSKARELINLLNDRQCPQSFSAEIFVKKVVSSCASPGSAPFAIAYVIVLVTSEVPYVMDLLLAELHRACLYTVPKHMVYKKSIFQSKEAYFRSIGYREDSEKLESTEDYLKRLESYMKLYGALVQTEIPNIRNLHGLQEGWAWLARFLNSMPANLYTAVSLDTFLQMAGFALFKRYKSQFVKMLNVISDKFLVDLKSHNAPESTKIVANIQAYIEDRKFRQVPEGRNMQSDTLSRVIIHKI 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03220 644 Gene3D - 349 627 IPR038506 -
Trre5g03220 644 Coils Coil 295 315 - -
Trre5g03220 644 Pfam GLE1-like protein 373 590 IPR012476 GO:0005643|GO:0016973
Trre5g03220 644 Coils Coil 245 287 - -
Trre5g03220 644 FunFam Protein GLE1 351 624 - -
Trre5g03220 644 PANTHER GLE-1-RELATED 33 637 IPR012476 GO:0005643|GO:0016973
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03220 Trre-Chr5 28008892 28018157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03220 K18723 - gmx:100802744 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03220 5 28008892 28018157 Trre5g03220 5 28008892 28018157 ECH