Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03205 ATGAGAAACAGTATTTGTTCAAACGCCTTTCAGATAATTTCAAAACCAAAACTCCTAAGTCATGAATCAATGGAAAATTTACTCAATAGAAGATGGACACTGCCAAGCCCTGAAACCAAAATTCATCAAGTAATTCACAGACAAGGATTGGATGGTCGTAGTAATTTCCTATTAAACACCAATCCTGATTTTGATGATGGCAATGCTAGGAAGAAGAACCACTTTTATGTCGTGCGGGATGATTTGTTGCATCCTATAATTAATGGTAACAAAGCAAGAAAACTTGATGGATTACTTCCCTTGCTTCAAGATTATTCAGTCACTGATGTGGTTACATGTGGAGGTTGTCAGAGTGCTCACACAGCTGCTATTGCTGTTCTATGTGCTGAGAGAGGAATTACTTCACATCTGCTTCTACGAGGAGAGCAGCCTGAAATCTTAACTGGCTATAATTTGATGTCTACAATATATGGAAATGTTACGTATGTTCCAAGAAATATTTATGCTAACAGGGAAGACATGCTAAAGATCTATGCTAAGTCAGTGGCCGGAAACAGTGGTTCTGTCCTATGGTTTAGTGATATCATTGAAGCTTCTTCAACAAACAAATTGTCTAATTCTCCAAATTATATGCAACTGGATGCTAGTAGAAGCGACTCAAGTAAGGGAAACCCTCTTCAAAAGATTTTAATTGTCAATGAAGGGGCCGGTGATTCTGTTGCTCTACTAGGTATTATTCGGTTAGTGCAATATTTATCACAAAATCATTTACTTGGGAAACAAAGGGCCGTGAAATTTGTCGTGGATGCTGGCACTGGCACAACAGCTGTTGGTATAAGACTTGCAGCTCTTTGCTTAGGACTCCCATGGGAGGTATATGCAGTCATGCTGGCTGATAAAATTGATGGTTACCAAAAACAGGAAAAGCGCTTGATTTCTGAATTCAATAAGAATTTTAATGTTGAGTTTATTGTTCACGATGTAAACAAAGAAGATGCCGGGATAGTGCATTGGGTGGAACGTGACCGTCCAAGAAAATTTGGCAATATTTTGGATGGAGAAATGGTAGTATGTCAGCAAATTGCTCAGCAAACTGGGATTCTAGTGGATCCTGTGTACACATTAGCTGCTTGGGAAACGGCAATGCTTCTTTCTAGCGAAGAGGATGAAGGAGGAGCAGAAGTGGCGATGCTTCACACCGGAGGCACGCTGGGCATGTTTGGGCTAGCTCAAAGGTACAAAAATTATTTTGGCATGCTCAAAAAGGGATTCAATCATGATTAA 1284 0.398 MRNSICSNAFQIISKPKLLSHESMENLLNRRWTLPSPETKIHQVIHRQGLDGRSNFLLNTNPDFDDGNARKKNHFYVVRDDLLHPIINGNKARKLDGLLPLLQDYSVTDVVTCGGCQSAHTAAIAVLCAERGITSHLLLRGEQPEILTGYNLMSTIYGNVTYVPRNIYANREDMLKIYAKSVAGNSGSVLWFSDIIEASSTNKLSNSPNYMQLDASRSDSSKGNPLQKILIVNEGAGDSVALLGIIRLVQYLSQNHLLGKQRAVKFVVDAGTGTTAVGIRLAALCLGLPWEVYAVMLADKIDGYQKQEKRLISEFNKNFNVEFIVHDVNKEDAGIVHWVERDRPRKFGNILDGEMVVCQQIAQQTGILVDPVYTLAAWETAMLLSSEEDEGGAEVAMLHTGGTLGMFGLAQRYKNYFGMLKKGFNHD 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03205 427 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED 16 418 IPR027278 -
Trre5g03205 427 Gene3D - 205 416 IPR036052 -
Trre5g03205 427 FunFam D-cysteine desulfhydrase 2 mitochondrial 216 416 - -
Trre5g03205 427 FunFam D-cysteine desulfhydrase 2, mitochondrial 90 191 - -
Trre5g03205 427 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 72 414 IPR036052 -
Trre5g03205 427 Gene3D - 90 192 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03205 Trre-Chr5 27702154 27705562 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03205 K05396 - gmx:100801680 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03205 5 27702154 27705562 Trre5g03205 5 27702154 27705562 ECH