Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03204 ATGCCTTCTCGCGGCGGCGTTCCAGTGGCGGAGGCTCTTCTCCCCTCCGGCCGAAACCCCGAGAGGCTAAGCCTCCCAGCACTCCAATCAAAGATGAAATGCGACCCCGAAGGTTACGAATCGGAGCTACTCCTTATCCGTAGCCAATTCGATTCATCACTCGAACTCTTCAAACAACAAGCTGATATGAACTTCACTTCCATCTCCGGCATCAGCAACGATCCTACCGTCGCAAGAGATCTCGCTGAAAAGGCTATGTTTCTCTCACACGTTACTAGCTTTTTCCCTCAACACCTCACTGATTTCCCTCACAAACTCGCGGAATTGCTTCATCGTGCCGCACGAACACTTCCTTCTGGACTTCGTAATGACCTAACGAAATCGCTTATCCTGCTTATCAATCGACAGATTATTAGTATTAAAGAAATGCTTCCGTTGTTCATGGAGCTTCAAACCCTAGGTGATAAAGCGTTGAGGGAAATGGCTTTTAAGCATATTGTTCAAAGCATAAAGCGTATGAACTTAAAGCATAAGGATGAAGCCAAAAACCGTGCACTTCAGAATATTCTTTTTGTTATGCTACAGCAAGAGGATGAAAATCGGGCGAGGAGGGCGCTTGTGACTCTATGTGACCTTCACAAGAGACAAATATGGTTTGATGAGAGAACAGCAAATGCAATTTGCACTGCTTGCTTCCATCCATCGTCAAGAATCATGATATCATCATTATGCTTTCTGCTTGATTATGAGAAGATTGAAAACTACCAAGATAGTGATGATTCAAGCAGTGACGAAGACATGACTGAATCACCTCAAGTTATTCTTAGAAGGGAGACAATTTATAAGGCAAACCACCAAGGTACATCAGCTAGCAAAAAGAAAAAGAAAAAGAAATTAGACCGCATAGTGCGCAGCATGAAAAAGAAACAGCGTATATCGTCTGACAGGAACAATAACATCTATTATTCACCACTCAACAATCTGATAGATCCCCAGGGTTTTGTTGAGAAGCTGTTTGCGCGTCTGCAGAAATGTAATGAAAGATTTGAGGTCAAGATGATGATGTTGAAAGTGATTGCTCGAACAGTTGGGCTTCACCAGTTAATTTTGTTAAACTTTTACCCTTATCTTCAGAAATATATCCAGCCCCATCAACGAGATGTTACAAATTTACTTGCAGCAGCGGTTCAAGCTTGTCATGATATGGTTCCTCCTGATGCAGTTGAGCCCTTATTCAAACAAATTGTAAATCAATTTGTACACGACCGCTCACGTCCAGAGGCTATCACTGTTGGAATAAATGCTGTCAGGGAGATATGCCTGCGTATACCTCTGTTGATGAATGAAGACCTACTACAAGACCTTGCTCTATATAAGAAATCACATGAGAAGGGAGTATCAATAGCAGCTCGATCTCTGATTGCATTATTCCGAGAGGTTTGCCCTTCACTGCTAATTAAGAAGGACCGAGGGCGACCTATTAACCCGACGGCAAGACCAAAGGCTTATGGGGAAGTCAATGTTGCAACTGATGTTCCTGATGCTGAGCTGTTACAGATTACTGACGATGACGTTGAGCAGGAAAGTTTAAATTCTGATGATTCTGTATGCAGTGGCTCAGACAATGACCAGGAAAGTTTAAATTCTGATGATGAGAACCAGCTAGGCAGTGATGATGAAGTCAATGATCATGATGTCGCATCAGACAATGAAAATGATGGAAGTTCTGATTGTGAAACCGGTGCTGATGATGTTGAAGACGAGGAGGATGATCTAGAAGATAGTGAAGAGTCTGATGATGAGGATGGTGAGATTTCGGAAGATGGAGATGATGATCTCGATACTTATAGTCATGATGGAAGTTTGGAGACAACAACTACATTGAAAGACTCAGCAAAAAAGAGGAAGTTTAGTGATTTCAATGATCAAATTACAGCTGCTGATTCAAGTCTCCGGGCTTTGAAGAAATTGGCAGGGACAACAATGGAGGATGCCATGCTAGAAGCTGAAGATGGAATTCTTTCTAATGAAGACTTCCAGAGGATCAAGGAACTAAAGGCAAAAAAAGAGGCAAGAACTGCATTAGCACAGCACGGGCTTGTAAAGTCAACAGTAAATAAGATTCGAAGCTCTGATCAACTAAGTTTAAAGCGAGTGGATGGTTCCATGCTTGAAGCTCATGTAAAGAGAAAGCTAAACAAGGCGGAGAGGTTGGCAATGGTTAAAGAAGGGAGGGAGGAAAGAGGAAAGTACCAGTCTCGAGCTGCTGTAAAACAGAAAAAGACGGGTGGTCTAAGTAACAAACAGAAGGAGCACAAGAAAATTATGCCGGTAGTTGCAAAGAGAAAAAAGCTGGCAAGAGCTCGGATAGATAGAAGGAAAAAAGATCGTCGATCTGGTAAACAACAACGTGGGAAGAAAGCGTGGAAACAGTGA 2436 0.4257 MPSRGGVPVAEALLPSGRNPERLSLPALQSKMKCDPEGYESELLLIRSQFDSSLELFKQQADMNFTSISGISNDPTVARDLAEKAMFLSHVTSFFPQHLTDFPHKLAELLHRAARTLPSGLRNDLTKSLILLINRQIISIKEMLPLFMELQTLGDKALREMAFKHIVQSIKRMNLKHKDEAKNRALQNILFVMLQQEDENRARRALVTLCDLHKRQIWFDERTANAICTACFHPSSRIMISSLCFLLDYEKIENYQDSDDSSSDEDMTESPQVILRRETIYKANHQGTSASKKKKKKKLDRIVRSMKKKQRISSDRNNNIYYSPLNNLIDPQGFVEKLFARLQKCNERFEVKMMMLKVIARTVGLHQLILLNFYPYLQKYIQPHQRDVTNLLAAAVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGINAVREICLRIPLLMNEDLLQDLALYKKSHEKGVSIAARSLIALFREVCPSLLIKKDRGRPINPTARPKAYGEVNVATDVPDAELLQITDDDVEQESLNSDDSVCSGSDNDQESLNSDDENQLGSDDEVNDHDVASDNENDGSSDCETGADDVEDEEDDLEDSEESDDEDGEISEDGDDDLDTYSHDGSLETTTTLKDSAKKRKFSDFNDQITAADSSLRALKKLAGTTMEDAMLEAEDGILSNEDFQRIKELKAKKEARTALAQHGLVKSTVNKIRSSDQLSLKRVDGSMLEAHVKRKLNKAERLAMVKEGREERGKYQSRAAVKQKKTGGLSNKQKEHKKIMPVVAKRKKLARARIDRRKKDRRSGKQQRGKKAWKQ 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03204 811 MobiDBLite consensus disorder prediction 743 811 - -
Trre5g03204 811 MobiDBLite consensus disorder prediction 775 811 - -
Trre5g03204 811 Pfam SDA1 447 807 IPR007949 -
Trre5g03204 811 MobiDBLite consensus disorder prediction 526 634 - -
Trre5g03204 811 Pfam NUC130/3NT domain 87 138 IPR012977 -
Trre5g03204 811 PANTHER HSDA/SDA1-RELATED 22 806 IPR027312 GO:0000055|GO:0042273
Trre5g03204 811 SUPERFAMILY ARM repeat 88 484 IPR016024 -
Trre5g03204 811 MobiDBLite consensus disorder prediction 576 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03204 Trre-Chr5 27694624 27699870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03204 K14856 - gmx:100816774 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03204 5 27694624 27699870 Trre5g03204 5 27694624 27699870 ECH