Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03180 ATGGCCAAGATGAATTGTGCTGTCGAAGGTGGCTGTCCCACTGACTATGTAGCTGTTACTGTATCCATTGTCTCCTTCATTATGCTACTTGTATGGTCAACATTTCCCTTCATAGTTCACAAGGTTCCTCGTACTAAAGGAAGTGGTTTTTGGATACCTGTAATCCAAGTTGTTGCCAGCTTCAACCTTCTGCTATCAATTATGATGTCAAACATTTTCTTGAAATTTGAAAAGAGGCATTGGTGGCATTCATGCTACTTGTGGGCAGTTTGGGGTGAAGGTCCACTAGGGTTTGGTTTGTTGTTGAGTTGCCGCATAACACAAGCATTTCAGTTATATTTTATCTTTGTCAAGAGGCGTTTACCACTAATCAGATCATTCCTTTTAATTCCACTTATTCTATTTCCCTGGATTGTTGGTGCTGCTGTTATCCATATAAAGAAGCCTCTTAACAATCGCTGCCACATGTCGGCTCAGTGGACCATACCAGTTGCCATCCTTCATTCATTGTATGTTGCCACTTTGGTTGGGGTAACTGCTGCTGTTCATCATATAGAGTTCAGGTTTGATGAACTTAGAGACCTCTGGCGGGGAATACTTGTATCATCTGTATCCATCGTTGTATGGATTACTGCTTACGTACTTAATGAAATTCATGACAATATCCGGTGGCTTGAAGTTGTCTCCAGATTTCTTCTTTTAGTTTTGGCTAGCATACTCGTTCTGGCATTCTTTTCAATATCAAGTTCACAACCACTGCTCTCACAAATCAGCTTGAGGAGAAGAGAATCCAGAGAATTTCGCACAATGGGACAGGCTTTGGGAATACCTGATAGTGGGGTATTAACACAAAGTGAACAGAATTCGAGAATAGATCCTAATGAACCATTGGATAAGCTTCTCTTGAACAAGAAATTCAGGCAGTCTTTTATGGCATTTGCTGATAGTTGTTTGGCTGGGGAGAGTGTACACTTCTTTGATGAGGTGCATGAGCTAAATAAAATATCGGAAAATGACTGCGTGAGAAGAATCTATATGGCACGGCATATTATTGAGAAGTACATAGTTGCAGGTGCGGCTATGGAGATAAACATCTCTCACAGAAGCAGACAGGAAATTTTGTCAACTTCCGACCTTGCACGCGCCGATCTCTTTCATAATGCACTTAATGAGATCGTGCAGCTGATGAAAACGAACTTGGCAAAAGATTATTGGTCATCAATGTTCTTCCTGAAGTTCCAAGAGGAATGTGATATGAGATGTAATGGCTATGAGCTCGAGCAAATGACAGGGTGGAACTATTCTCCAAGGTTGAGTTCTGTGCATGGTACAGATGATCCTTTTCACCAACAAGATCATCTTTTGAAGAACTCAGAATGTGGCAATGATACTGACTCATGA 1401 0.4111 MAKMNCAVEGGCPTDYVAVTVSIVSFIMLLVWSTFPFIVHKVPRTKGSGFWIPVIQVVASFNLLLSIMMSNIFLKFEKRHWWHSCYLWAVWGEGPLGFGLLLSCRITQAFQLYFIFVKRRLPLIRSFLLIPLILFPWIVGAAVIHIKKPLNNRCHMSAQWTIPVAILHSLYVATLVGVTAAVHHIEFRFDELRDLWRGILVSSVSIVVWITAYVLNEIHDNIRWLEVVSRFLLLVLASILVLAFFSISSSQPLLSQISLRRRESREFRTMGQALGIPDSGVLTQSEQNSRIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFDEVHELNKISENDCVRRIYMARHIIEKYIVAGAAMEINISHRSRQEILSTSDLARADLFHNALNEIVQLMKTNLAKDYWSSMFFLKFQEECDMRCNGYELEQMTGWNYSPRLSSVHGTDDPFHQQDHLLKNSECGNDTDS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03180 466 Gene3D - 282 418 IPR044926 -
Trre5g03180 466 ProSiteProfiles RGS domain profile. 296 414 IPR016137 -
Trre5g03180 466 PANTHER REGULATOR OF G PROTEIN SIGNALING 266 413 - -
Trre5g03180 466 SUPERFAMILY Regulator of G-protein signaling, RGS 273 415 IPR036305 -
Trre5g03180 466 Pfam Regulator of G protein signaling domain 297 413 IPR016137 -
Trre5g03180 466 SMART RGS_3 296 414 IPR016137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03180 Trre-Chr5 27392795 27397354 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03180 - - gmx:100813598 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03180 5 27392795 27397354 Trre5g03180 5 27392795 27397354 ECH