Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03179 ATGTATTTGCAGTATTCTGAACAAGATGGAAAACCTTTACCGAAGTTTGGAGAATGGGATGTAAATGATCCGGCCTCAGCGGAAGGTTTCACCGTTATATTCAACAAGGCTAGAGATGAAAAGAAAATTGCCTCTGCATCTGGACGGTTTCCTTCACAGCGAAGGTATGACTCTCGCACCAGTCGCACCAAGGATAACAATAAAAAATTAAATTCGTCCTCAAAGAAAAAGTGGTTTTGCTTTAGCGCTTAG 252 0.4127 MYLQYSEQDGKPLPKFGEWDVNDPASAEGFTVIFNKARDEKKIASASGRFPSQRRYDSRTSRTKDNNKKLNSSSKKKWFCFSA 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03179 83 MobiDBLite consensus disorder prediction 44 83 - -
Trre5g03179 83 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 7 80 IPR040387 -
Trre5g03179 83 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 8 42 IPR008700 -
Trre5g03179 83 MobiDBLite consensus disorder prediction 55 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03179 Trre-Chr5 27390144 27390553 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03179 - - gmx:102669045 130.183